Entry information : PpaPrx34 (PP00008G00930)
Entry ID 6307
Creation 2008-08-06 (Christophe Dunand)
Last sequence changes 2008-08-06 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: PpaPrx34 (PP00008G00930)
Name (synonym) PpaPrx34 (PP00008G00930)
Class Class III peroxidase    [Orthogroup: Prx039]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx34
start..stop
S start..stop
SmPrx52-1_16 336 2e-115 4..317 31..346
SmPrx52-2_1 335 3e-115 10..317 32..346
EcamPrx85 319 4e-109 10..317 12..319
EglPrx85 318 8e-109 10..317 12..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1722076..1723038 963  
complement(join(1722076..1723038))


exon

Literature and cross-references PpaPrx34 (PP00008G00930)
Literature Rensing,S. et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008)
DNA ref. Phytozome 12:   scaffold_8 (1723038..1722076)
Protein sequence: PpaPrx34 (PP00008G00930)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (299)
PWM (Da):   %s   34633.79 (32346.5)  
PI (pH):   %s   6.88 (7.70) Peptide Signal:   %s   cut: 22 range:22-320
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEWGSVLILL LLSSVILFSE GHLSSDYYKS TCPNVERVVR SSLRRAFLLD PSAPASLLRL SFHDCQVEKC DASILLDSVS NDINGERESG GNFGIRRLDI IDRVKQDLEK ECPGVVSCAD  IVAMAGRDAV SYTGGPEIPI PLGRKDATTA SSENADDQLP PASSTVSTML QVFSRYGMTA AETVGILGAH TLGIGHCVNV VDRLYPTRDP ALSTGLYLQL RVLCPTKEPL NLTILPNDLS 
VYSFDNRYFK DVLGGRGLFR ADANLVGDAR TKPLVAKFAS DQSLFFKTFA SAYVKLVSAQ VLTGSRGEVR TNCRRVNAQD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no introns). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTGGG GATCCGTTTT GATATTATTG CTGCTGAGCA GTGTGATCCT CTTCAGTGAA GGGCACTTGA GCTCAGATTA TTATAAAAGC ACATGCCCTA ACGTCGAACG GGTTGTGCGC  AGCAGCTTGA GAAGAGCGTT TCTGCTAGAT CCAAGTGCTC CAGCTTCTCT GCTTCGCCTC TCCTTCCACG ATTGCCAAGT TGAGAAATGT GATGCGTCCA TCTTGTTAGA CTCCGTCTCC  AATGACATCA ACGGGGAAAG AGAGTCAGGC GGGAATTTTG GCATTCGACG ATTGGATATC ATCGACCGAG TGAAGCAAGA TCTCGAAAAG GAGTGCCCGG GGGTCGTATC CTGCGCTGAT  ATCGTAGCCA TGGCTGGTCG AGACGCTGTC TCTTACACAG GTGGGCCTGA AATTCCCATT CCGTTGGGCC GCAAGGACGC AACAACTGCA AGCAGCGAAA ATGCTGACGA TCAGCTGCCA  CCAGCTTCCT CCACCGTCTC CACGATGCTC CAGGTCTTCT CGCGTTATGG CATGACCGCG GCTGAGACCG TCGGTATTCT GGGAGCGCAT ACTCTGGGCA TAGGGCACTG CGTCAATGTG  GTAGACAGAT TGTATCCCAC TCGAGACCCC GCTCTGTCCA CAGGACTTTA CCTGCAGCTA CGCGTTCTGT GCCCCACCAA GGAGCCCCTC AACCTCACCA TACTCCCTAA CGACCTCTCA  GTCTACAGCT TCGACAACCG CTACTTCAAG GATGTGCTCG GCGGCCGAGG ACTCTTCCGA GCTGATGCGA ATCTGGTAGG TGACGCTCGT ACCAAGCCTT TGGTTGCGAA GTTTGCGTCC  GACCAGAGCT TGTTCTTCAA GACCTTTGCC TCGGCGTATG TGAAGCTGGT GTCCGCCCAA GTGTTGACAG GAAGTCGGGG GGAGGTGCGC ACCAACTGCC GACGAGTAAA TGCACAGGAC 
TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGTGGG GATCCGTTTT GATATTATTG CTGCTGAGCA GTGTGATCCT CTTCAGTGAA GGGCACTTGA GCTCAGATTA TTATAAAAGC ACATGCCCTA ACGTCGAACG GGTTGTGCGC  AGCAGCTTGA GAAGAGCGTT TCTGCTAGAT CCAAGTGCTC CAGCTTCTCT GCTTCGCCTC TCCTTCCACG ATTGCCAAGT TGAGAAATGT GATGCGTCCA TCTTGTTAGA CTCCGTCTCC  AATGACATCA ACGGGGAAAG AGAGTCAGGC GGGAATTTTG GCATTCGACG ATTGGATATC ATCGACCGAG TGAAGCAAGA TCTCGAAAAG GAGTGCCCGG GGGTCGTATC CTGCGCTGAT  ATCGTAGCCA TGGCTGGTCG AGACGCTGTC TCTTACACAG GTGGGCCTGA AATTCCCATT CCGTTGGGCC GCAAGGACGC AACAACTGCA AGCAGCGAAA ATGCTGACGA TCAGCTGCCA  CCAGCTTCCT CCACCGTCTC CACGATGCTC CAGGTCTTCT CGCGTTATGG CATGACCGCG GCTGAGACCG TCGGTATTCT GGGAGCGCAT ACTCTGGGCA TAGGGCACTG CGTCAATGTG  GTAGACAGAT TGTATCCCAC TCGAGACCCC GCTCTGTCCA CAGGACTTTA CCTGCAGCTA CGCGTTCTGT GCCCCACCAA GGAGCCCCTC AACCTCACCA TACTCCCTAA CGACCTCTCA  GTCTACAGCT TCGACAACCG CTACTTCAAG GATGTGCTCG GCGGCCGAGG ACTCTTCCGA GCTGATGCGA ATCTGGTAGG TGACGCTCGT ACCAAGCCTT TGGTTGCGAA GTTTGCGTCC  GACCAGAGCT TGTTCTTCAA GACCTTTGCC TCGGCGTATG TGAAGCTGGT GTCCGCCCAA GTGTTGACAG GAAGTCGGGG GGAGGTGCGC ACCAACTGCC GACGAGTAAA TGCACAGGAC 
TAG 

Retrieve as FASTA