Entry information : Ppa1CysPrx01
Entry ID 6322
Creation 2008-08-08 (Christophe Dunand)
Last sequence changes 2008-08-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-02 (Christophe Dunand)
Peroxidase information: Ppa1CysPrx01
Name Ppa1CysPrx01
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue types Mixed tissues
Protonema
Sporophyte
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ppa1CysPrx01
start..stop
S start..stop
Ppa1CysPrx03 437 3e-159 1..222 1..222
Mp1CysPrx01 406 1e-146 1..221 1..221
Spra1CysPrx02 345 1e-122 1..219 1..219
Ss1CysPrx02_AU1 344 2e-122 12..221 2..211
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2380898..2381566 669  
complement(join(2380898..2381566))


exon

Literature and cross-references Ppa1CysPrx01
Literature Rensing,S.A. et al., The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319 (5859), 64-69 (2008)
DNA ref. Phytozome 11:   scaffold_32 (2381566..2380898)
Cluster/Prediction ref. UniGene:   Ppa.14978
Protein sequence: Ppa1CysPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   222
PWM (Da):   %s   24135.39  
PI (pH):   %s   6.12
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALKLGDTAP SFVADSTHGT IDFHKYIDGS WAILFSHPND FTPVCTTELG AVGKFLPEFE KRGVKVIALS CNDVESHKGW IADIESYTPG AKVSYPIVAD PTRELAVKFG MLDPEEIDGK 
GVPLTARAVY IFGPDKKLKL SILYPATTGR NFNEVLRVID SLQLTANYSV ATPVNWNQGD KCMVVPSLSN EAAKEKFPKG FETVEVPSGK SYIRLTPQPN VD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 57 ESTs. Ecotype="Gransden 2004".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATTGA AGTTGGGCGA CACAGCGCCA TCCTTCGTGG CGGACTCGAC GCACGGGACA ATCGACTTCC ACAAGTACAT TGATGGTTCC TGGGCTATCT TGTTCTCGCA CCCCAACGAC  TTCACGCCCG TGTGCACCAC GGAGCTCGGA GCCGTAGGGA AGTTTCTGCC GGAGTTTGAG AAGCGCGGGG TGAAGGTGAT TGCGTTGTCG TGCAACGATG TGGAGTCGCA CAAGGGCTGG  ATTGCTGATA TCGAGAGTTA CACCCCAGGT GCTAAGGTCA GCTACCCTAT CGTGGCCGAT CCGACTCGGG AACTCGCTGT GAAGTTTGGG ATGCTGGATC CCGAGGAAAT TGATGGCAAG  GGTGTTCCTT TGACGGCGAG GGCAGTGTAC ATCTTCGGCC CAGACAAGAA GCTAAAGTTG TCAATCTTGT ACCCAGCTAC GACCGGGAGG AACTTCAATG AGGTTTTGCG TGTGATTGAC  TCGCTTCAGC TCACTGCCAA TTATAGCGTT GCTACCCCTG TCAATTGGAA CCAGGGAGAC AAGTGCATGG TCGTGCCTTC CCTCTCTAAT GAAGCTGCCA AGGAGAAGTT CCCGAAGGGT 
TTTGAGACTG TGGAAGTCCC GTCTGGGAAA AGCTACATTC GTCTTACTCC TCAGCCAAAT GTGGATTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATTGA AGTTGGGCGA CACAGCGCCA TCCTTCGTGG CGGACTCGAC GCACGGGACA ATCGACTTCC ACAAGTACAT TGATGGTTCC TGGGCTATCT TGTTCTCGCA CCCCAACGAC  TTCACGCCCG TGTGCACCAC GGAGCTCGGA GCCGTAGGGA AGTTTCTGCC GGAGTTTGAG AAGCGCGGGG TGAAGGTGAT TGCGTTGTCG TGCAACGATG TGGAGTCGCA CAAGGGCTGG  ATTGCTGATA TCGAGAGTTA CACCCCAGGT GCTAAGGTCA GCTACCCTAT CGTGGCCGAT CCGACTCGGG AACTCGCTGT GAAGTTTGGG ATGCTGGATC CCGAGGAAAT TGATGGCAAG  GGTGTTCCTT TGACGGCGAG GGCAGTGTAC ATCTTCGGCC CAGACAAGAA GCTAAAGTTG TCAATCTTGT ACCCAGCTAC GACCGGGAGG AACTTCAATG AGGTTTTGCG TGTGATTGAC  TCGCTTCAGC TCACTGCCAA TTATAGCGTT GCTACCCCTG TCAATTGGAA CCAGGGAGAC AAGTGCATGG TCGTGCCTTC CCTCTCTAAT GAAGCTGCCA AGGAGAAGTT CCCGAAGGGT 
TTTGAGACTG TGGAAGTCCC GTCTGGGAAA AGCTACATTC GTCTTACTCC TCAGCCAAAT GTGGATTGA 

Retrieve as FASTA