Entry information : CruPrx08
Entry ID 6332
Creation 2008-09-05 (Christophe Dunand)
Last sequence changes 2010-06-01 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-06-02 (Christophe Dunand)
Peroxidase information: CruPrx08
Name CruPrx08
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue types Ovule
Sporophyll
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx08
start..stop
S start..stop
CmichPrx14 694 0 1..339 5..343
GbPrx13 552 0 36..339 24..327
PabPrx64 550 0 16..339 7..331
PtaPrx41 546 0 22..339 10..331
Literature and cross-references CruPrx08
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Cycas sporophyll (w/o ovule) (NYBG)
EST ref. GenBank:   EX927473.1 [5' end]   EX917445.1 [3' end]
Protein sequence: CruPrx08
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (303)
PWM (Da):   %s   36806.88 (33209.0) Transmb domain:   %s   i13-35o
PI (pH):   %s   9.87 (9.53) Peptide Signal:   %s   cut: 37 range:37-339
Sequence
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Send to Peroxiscan
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MMSAGRGKGQ WKAMMSSLGL LVVALVVLST PNAAAAQLSF DYYKHTCPQV ENIIRAEMIR KQAANPTTAA GTLRIFFHDC FVEGCDASVL IRSTPNNKAE KDAEINLSLP GDGFDAVARA  KAAVEAKCPG VVSCADILSI TTRDLISLVG GPYYPVKKGR RDGRVSKASR VAGNLPLPTM SLDRLNALFR SKGLTQAEMV TLSGAHTVGF AHCKEFRHRI YNFNRTVHID PTMNFQYAKE 
LRQACPRVNL DPTIVAFNDV NSPRKFDNGF YQNLPKGLGL LASDQLLYTD PRSRGLVQAY ASNQAAFFKA FVAAMDKLGS VGVKTGREGE VRTRCDAFN 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs. Frame:1[16-1035] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGCAGTGGA AGGCAATGAT GAGTGCTGGT AGAGGCAAAG GGCAGTGGAA GGCAATGATG AGTAGTTTAG GTCTACTTGT GGTGGCCTTG GTGGTTCTGT CGACACCCAA TGCCGCTGCT  GCGCAACTGT CTTTTGATTA TTACAAACAC ACATGCCCGC AGGTAGAAAA CATCATTCGT GCAGAGATGA TACGCAAGCA AGCTGCCAAT CCCACCACCG CTGCAGGCAC CTTGCGCATC  TTCTTCCACG ACTGCTTTGT TGAGGGATGT GATGCGTCGG TGCTTATCAG ATCTACTCCG AACAATAAGG CCGAGAAGGA CGCCGAAATA AATCTGTCAT TACCCGGCGA TGGCTTCGAT  GCAGTCGCGC GAGCCAAGGC TGCTGTCGAA GCAAAATGTC CAGGCGTTGT TTCGTGTGCA GATATCCTCT CCATAACCAC AAGGGACCTG ATCTCCTTGG TGGGAGGGCC GTACTATCCT  GTAAAGAAAG GGCGGAGAGA TGGGAGGGTC TCAAAGGCCT CCAGAGTAGC AGGCAATCTC CCTCTGCCCA CAATGAGTTT GGATCGTCTC AATGCTCTTT TCAGATCAAA GGGCCTCACT  CAGGCTGAAA TGGTCACGCT GTCTGGAGCC CACACGGTGG GATTTGCCCA CTGCAAAGAA TTCAGGCACC GGATATACAA CTTCAACAGG ACCGTCCACA TCGACCCAAC CATGAATTTC  CAGTATGCCA AGGAACTGCG ACAAGCCTGC CCTCGGGTGA ATCTCGACCC CACAATAGTC GCCTTCAACG ATGTCAATTC TCCGAGAAAA TTCGACAATG GGTTCTACCA GAACCTGCCC  AAGGGTCTTG GCCTGCTTGC TTCGGATCAG CTGCTTTATA CCGACCCACG TTCCAGGGGC CTAGTCCAAG CCTATGCCTC CAACCAGGCA GCTTTCTTCA AAGCATTTGT GGCCGCCATG  GATAAGTTGG GCAGTGTGGG CGTCAAGACT GGCAGGGAAG GGGAGGTCAG GACGAGGTGT GATGCTTTCA ATTGATTCTC TTTCCACCTG TTTAAATAAG AGTCGCTCGC ATGGCTGGAA  CTGTGATTAT TAGTGCATGG ATTGTGTCCT CTCAACCCCC AGAAAACCTC CTCAAGAGAT TGTTTCATAG CTCCCTCCAT ATGAAACCCC CTGGGGTGAC TTTTCCCCTT TCCATAAGTA  CGAATTTAGA TTAATCTTTT TGCTCGCATA TCTTATAATT ACTGACTTAA CCTTGGGAAT TCACGGTGAC AGCAGAAGCC AAGTGGGGTC CTCTGCATCT TGTAATAAAT TACGAATATC  CTGTGCAGCA CTATCATAGT ACTTCTATGG GTCTGCTTAG AATATATCTA GAACAGTTTC TCAAAGAGTC GCCCTAGCTT CCTTCCTTCT TAGAAGCAAA ACAGTTTCAT GTACTGCAGG  AGAGCTAGCT TTTGTGTAAG GGCAGAAAAA GACGTGGCCG GGAGCCTACT TAAAACACTG CGACAATAGC GTCGGATTCT AAGGCAGGGA CATGTGGATC AAGCCGTGGA TGTATAAACT  ACAGGTTGAA ATTCACTTTC GTTGTATTTT GGTCTCCGAA CCACTCCAAT AATTAGTTAC TAGTTAATGG CTGTGCCAAG CTCAAGATTC TCATAAATTG TATCATCGTG TTAAAACGAG 
GATGATAAGT AATTGCACTT GTGTGTTTGT AT 

Retrieve as FASTA