Entry information : UmFRe01
Entry ID 6363
Creation 2008-09-22 (Christophe Dunand)
Last sequence changes 2008-09-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-03 (Catherine Mathe (Scipio))
Peroxidase information: UmFRe01
Name UmFRe01
Class Ferric Reductase    [Orthogroup: FRe001]
Taxonomy Eukaryota Fungi Basidiomycota Ustilaginomycetes Ustilaginaceae Ustilago
Organism Ustilago maydis    [TaxId: 5270 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value UmFRe01
start..stop
S start..stop
UmFRe02 258 2e-77 97..595 206..703
GzFRe01 238 4e-69 65..487 135..564
MgrFRe01 239 6e-69 65..487 144..573
PcFRe01 117 1e-27 135..595 299..753
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 153193..154980 1788  
complement(join(153193..154980))


exon

Literature and cross-references UmFRe01
Protein ref. UniProtKB:   Q4PBW8
DNA ref. JGI genome:   contig_1_83 (154980..153193)
Protein sequence: UmFRe01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   595
PWM (Da):   %s   65180.03 Transmb domain:   %s   o34-51i98-120o135-157i177-199o214-231i244-263o273-290i415-437o
PI (pH):   %s   9.63
Sequence
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Send to Peroxiscan
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MEKRHGSPTT AGIGLLPNTR TGDPWIGQPK YSQGITATIS IIIFLFALAS LHSRWQRSTK AAPASSSGRL TRPVAALRML AYRHLPSFRL ASINFRLPVL GATLGLSAFM LGFTIWAFVV  QPYYRVDRSF GSPPLALRAG MMALGLMPFI YTLASKVNFI SLLTGVSHER LQIFHQWLAR FMLFLATVHA IPFIHQPLAD HGVTGLREEF FSDSINTTGV IAYVCLFVLS FASTTGIRER  CYELFLLIHV PVAVLFLGYM FVHCQAMLTS WRYLWATTAL YMLSVFLRFA TQLQQNSFLS LAKCRVEAMP SDFAKITVES PMRWRPGQHV FVRFPGLSPL SAHPFTIISM PSADDQQLMS  TIVLMVKARK GLTKRLYDRA VRIQGEQAAK GLELSAVLDG PYGQDASVAT YHHALLLAGG SGITFVLASL LEVVWLWQKK AATTRRIHLV WSMRDVQSLN WARQHLVTVA CLAPQDALKV 
TIYVSGADPA SQNLDLPASW EVQWGVHPDA ASVLSEFIQG ISVPTEKDPD TEKACPSNSS TGPIEGPASA AVVVCGPSGM VKDAANATAT LQRDILCGKL SSLDNVSLIT EHFGF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron). No EST.
DNA
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ATGGAGAAGA GGCACGGCTC GCCCACTACG GCCGGCATCG GCTTGCTGCC TAATACCCGC ACTGGTGATC CTTGGATTGG TCAACCTAAA TACAGTCAAG GCATAACGGC GACGATCTCA  ATCATCATTT TCCTTTTTGC ACTGGCTTCA CTTCATTCGC GATGGCAGCG CTCGACCAAG GCAGCGCCAG CCTCGAGCTC TGGTAGACTC ACTCGACCCG TCGCAGCACT CCGCATGCTT  GCCTATCGAC ATCTGCCGTC TTTTCGCTTG GCGTCCATCA ACTTCCGTCT GCCCGTTCTC GGAGCTACTT TGGGATTGAG CGCCTTCATG CTTGGCTTCA CTATCTGGGC CTTTGTAGTG  CAACCGTATT ACCGTGTCGA CCGCAGTTTC GGTAGCCCGC CCCTAGCTCT GCGCGCTGGC ATGATGGCGC TTGGGCTGAT GCCTTTCATC TATACATTAG CTTCAAAAGT CAACTTTATT  TCTCTGCTTA CCGGAGTAAG TCATGAGAGG CTCCAAATTT TCCACCAATG GCTCGCTCGA TTTATGCTTT TCCTCGCCAC GGTCCACGCC ATTCCATTCA TCCATCAACC CTTGGCCGAC  CATGGCGTTA CTGGGCTACG AGAAGAGTTC TTCTCAGACA GCATCAACAC AACTGGTGTT ATCGCGTATG TATGTCTGTT TGTGCTTTCA TTTGCCAGCA CAACTGGCAT TCGCGAACGA  TGCTACGAGC TTTTTCTGCT CATCCATGTA CCCGTGGCGG TCCTCTTCCT GGGCTACATG TTTGTGCATT GCCAGGCGAT GCTGACATCT TGGAGATATC TCTGGGCTAC CACAGCCTTG  TACATGCTGT CTGTGTTCTT GCGATTCGCC ACTCAGCTCC AGCAGAACAG CTTCCTGTCG CTCGCAAAGT GCCGTGTCGA AGCCATGCCA AGTGACTTTG CAAAGATAAC GGTAGAATCA  CCTATGCGAT GGAGGCCTGG GCAACATGTG TTTGTGCGCT TCCCTGGTCT TTCACCTCTG TCAGCGCATC CCTTCACCAT CATCTCAATG CCCTCGGCCG ACGATCAGCA GTTGATGTCG  ACCATCGTAC TGATGGTGAA AGCCCGCAAA GGCCTCACAA AGCGCCTCTA CGACCGAGCA GTTCGGATTC AAGGCGAACA AGCAGCAAAA GGACTCGAAC TCTCAGCAGT GCTTGACGGC  CCGTATGGAC AAGACGCCAG CGTCGCCACC TACCATCATG CCTTGCTGTT GGCTGGTGGG AGCGGCATTA CCTTTGTCCT TGCATCGTTG CTTGAAGTGG TATGGCTTTG GCAGAAGAAA  GCTGCTACGA CGCGGCGTAT CCACCTGGTA TGGTCCATGC GCGATGTGCA ATCGCTCAAC TGGGCCCGCC AGCATCTCGT CACCGTTGCT TGCCTTGCAC CTCAAGACGC TCTTAAAGTA  ACGATCTATG TCAGCGGGGC AGACCCGGCA TCTCAAAACC TTGACCTACC AGCAAGTTGG GAAGTGCAGT GGGGCGTGCA TCCCGATGCT GCCTCTGTCT TGTCGGAATT CATTCAAGGG  ATATCCGTTC CGACGGAGAA AGACCCAGAC ACCGAAAAGG CATGTCCGAG CAACTCGAGC ACAGGCCCGA TCGAGGGTCC CGCCTCTGCA GCTGTGGTCG TATGCGGCCC TTCCGGAATG 
GTTAAGGACG CTGCGAATGC AACAGCAACG CTTCAGCGCG ACATTCTATG CGGCAAGCTG TCCAGTCTTG ATAATGTTTC TCTGATCACT GAACATTTTG GCTTCTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAGA GGCACGGCTC GCCCACTACG GCCGGCATCG GCTTGCTGCC TAATACCCGC ACTGGTGATC CTTGGATTGG TCAACCTAAA TACAGTCAAG GCATAACGGC GACGATCTCA  ATCATCATTT TCCTTTTTGC ACTGGCTTCA CTTCATTCGC GATGGCAGCG CTCGACCAAG GCAGCGCCAG CCTCGAGCTC TGGTAGACTC ACTCGACCCG TCGCAGCACT CCGCATGCTT  GCCTATCGAC ATCTGCCGTC TTTTCGCTTG GCGTCCATCA ACTTCCGTCT GCCCGTTCTC GGAGCTACTT TGGGATTGAG CGCCTTCATG CTTGGCTTCA CTATCTGGGC CTTTGTAGTG  CAACCGTATT ACCGTGTCGA CCGCAGTTTC GGTAGCCCGC CCCTAGCTCT GCGCGCTGGC ATGATGGCGC TTGGGCTGAT GCCTTTCATC TATACATTAG CTTCAAAAGT CAACTTTATT  TCTCTGCTTA CCGGAGTAAG TCATGAGAGG CTCCAAATTT TCCACCAATG GCTCGCTCGA TTTATGCTTT TCCTCGCCAC GGTCCACGCC ATTCCATTCA TCCATCAACC CTTGGCCGAC  CATGGCGTTA CTGGGCTACG AGAAGAGTTC TTCTCAGACA GCATCAACAC AACTGGTGTT ATCGCGTATG TATGTCTGTT TGTGCTTTCA TTTGCCAGCA CAACTGGCAT TCGCGAACGA  TGCTACGAGC TTTTTCTGCT CATCCATGTA CCCGTGGCGG TCCTCTTCCT GGGCTACATG TTTGTGCATT GCCAGGCGAT GCTGACATCT TGGAGATATC TCTGGGCTAC CACAGCCTTG  TACATGCTGT CTGTGTTCTT GCGATTCGCC ACTCAGCTCC AGCAGAACAG CTTCCTGTCG CTCGCAAAGT GCCGTGTCGA AGCCATGCCA AGTGACTTTG CAAAGATAAC GGTAGAATCA  CCTATGCGAT GGAGGCCTGG GCAACATGTG TTTGTGCGCT TCCCTGGTCT TTCACCTCTG TCAGCGCATC CCTTCACCAT CATCTCAATG CCCTCGGCCG ACGATCAGCA GTTGATGTCG  ACCATCGTAC TGATGGTGAA AGCCCGCAAA GGCCTCACAA AGCGCCTCTA CGACCGAGCA GTTCGGATTC AAGGCGAACA AGCAGCAAAA GGACTCGAAC TCTCAGCAGT GCTTGACGGC  CCGTATGGAC AAGACGCCAG CGTCGCCACC TACCATCATG CCTTGCTGTT GGCTGGTGGG AGCGGCATTA CCTTTGTCCT TGCATCGTTG CTTGAAGTGG TATGGCTTTG GCAGAAGAAA  GCTGCTACGA CGCGGCGTAT CCACCTGGTA TGGTCCATGC GCGATGTGCA ATCGCTCAAC TGGGCCCGCC AGCATCTCGT CACCGTTGCT TGCCTTGCAC CTCAAGACGC TCTTAAAGTA  ACGATCTATG TCAGCGGGGC AGACCCGGCA TCTCAAAACC TTGACCTACC AGCAAGTTGG GAAGTGCAGT GGGGCGTGCA TCCCGATGCT GCCTCTGTCT TGTCGGAATT CATTCAAGGG  ATATCCGTTC CGACGGAGAA AGACCCAGAC ACCGAAAAGG CATGTCCGAG CAACTCGAGC ACAGGCCCGA TCGAGGGTCC CGCCTCTGCA GCTGTGGTCG TATGCGGCCC TTCCGGAATG 
GTTAAGGACG CTGCGAATGC AACAGCAACG CTTCAGCGCG ACATTCTATG CGGCAAGCTG TCCAGTCTTG ATAATGTTTC TCTGATCACT GAACATTTTG GCTTCTAA 

Retrieve as FASTA