Entry information : AeuCcP01_201684 ( g2282.t1 / Ae201684_2282.1)
Entry ID 6375
Creation 2008-09-29 (Christophe Dunand)
Last sequence changes 2016-02-17 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-17 (Achraf Jemmat)
Peroxidase information: AeuCcP01_201684 ( g2282.t1 / Ae201684_2282.1)
Name (synonym) AeuCcP01_201684 ( g2282.t1 / Ae201684_2282.1)
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Saprolegniaceae Aphanomyces
Organism Aphanomyces euteiches    [TaxId: 100861 ]
Cellular localisation N/D
Tissue type N/D
Inducers Infected host
Saprophytic growth
Repressor N/D
Best BLASTp hits
Perox score E-value AeuCcP01_201684
start..stop
S start..stop
AeuCcP02_201684 512 0 1..326 1..326
SparCcP02 504 0 1..326 1..322
SparCcP01 447 2e-159 27..327 20..321
PparaCcP01 443 2e-157 1..337 1..334
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 835252..836280 1029  
complement(join(835252..836280))


exon

Literature and cross-references AeuCcP01_201684 ( g2282.t1 / Ae201684_2282.1)
Literature Madoui MA, Gaulin E, Mathé C, San Clemente H, Couloux A, Wincker P, Dumas B. AphanoDB: a genomic resource for Aphanomyces pathogens. BMC Genomics. 2007 Dec 20;8:471
EST ref. GenBank:   CU359978.1 [5' end]   CU356914.1 [3' end]
Cluster/Prediction ref. AphanoDB:   222474   Ae_3AL5437   Ae_2AL6231 [3' end]
Protein sequence: AeuCcP01_201684 ( g2282.t1 / Ae201684_2282.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342
PWM (Da):   %s   38028.22 Transmb domain:   %s   i40-62o
PI (pH):   %s   9.43
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFRQVASRVT RLSATARVMA PRAAARSLAT SAASRSTKQV NAAAISAAFL VTAGASMTML QAKDQPVDLP KIRSEIVSLI EKDNYLGPTL VRLAWHSSGT YSKKDNSGGS KGGTIRFDPE  INHGANAGLN TAVDKLEAIK ERYPNISYAD LYVFAGVVAI AEMGGPEVKF HLGRKDAESG AECTPDGRLP DADKGSKPNT INHVREIFYR MGFNDREIVA LIGAHAVGRC YPTRSGYSGP 
WTRAEWTFSN EYYRELIENK WTLKKWKGPE QYTDPTGELM MLPADMAFIW DPEFKKYVEL YAKDEELWHK DFAKAFQKLT ENGCNLEKNG WRRYIFFGPR GD 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs and genomic (scaffold4, no intron). Tandemly duplicate with AeuCcP02_201684.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCCGTC AAGTTGCCTC CCGTGTGACC AGATTGAGCG CGACCGCTCG CGTGATGGCT CCCCGTGCCG CAGCCCGCAG CCTCGCCACG TCTGCTGCAT CAAGATCGAC CAAGCAAGTT  AACGCTGCCG CCATCTCAGC TGCTTTCCTT GTCACAGCGG GTGCTTCCAT GACTATGTTG CAAGCCAAGG ATCAACCCGT GGACCTCCCC AAGATTCGCT CGGAAATTGT CAGCTTGATT  GAAAAGGACA ACTACTTGGG ACCTACTTTG GTCCGCTTGG CGTGGCATTC GTCTGGCACG TACAGCAAGA AGGACAACAG CGGTGGCTCC AAGGGCGGAA CTATCCGCTT TGACCCTGAA  ATCAACCATG GTGCGAATGC TGGTTTGAAC ACGGCTGTTG ACAAGCTCGA AGCGATCAAG GAACGCTACC CCAACATTTC CTACGCTGAT TTGTATGTGT TCGCTGGTGT TGTCGCCATT  GCCGAAATGG GAGGTCCTGA AGTCAAGTTC CATTTGGGCC GTAAGGATGC CGAGTCTGGC GCTGAATGCA CTCCTGATGG TCGCTTGCCC GATGCTGATA AGGGAAGCAA GCCAAACACT  ATCAACCATG TCCGTGAAAT TTTTTACCGC ATGGGATTCA ACGACCGTGA AATCGTTGCT CTCATCGGTG CCCATGCCGT TGGTCGTTGC TACCCTACGC GTAGTGGCTA CAGCGGTCCT  TGGACCCGCG CAGAGTGGAC ATTCTCCAAT GAGTACTACC GCGAACTCAT TGAAAACAAG TGGACTTTGA AGAAGTGGAA GGGTCCTGAA CAATACACAG ACCCCACTGG TGAGCTCATG  ATGTTGCCTG CTGACATGGC TTTCATCTGG GACCCCGAAT TCAAGAAGTA CGTCGAGTTG TATGCCAAGG ATGAAGAATT GTGGCACAAG GACTTCGCCA AGGCTTTCCA AAAGCTCACT 
GAAAATGGTT GCAACTTGGA AAAGAACGGC TGGCGCCGCT ACATTTTCTT CGGACCTCGT GGCGATTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCCGTC AAGTTGCCTC CCGTGTGACC AGATTGAGCG CGACCGCTCG CGTGATGGCT CCCCGTGCCG CAGCCCGCAG CCTCGCCACG TCTGCTGCAT CAAGATCGAC CAAGCAAGTT  AACGCTGCCG CCATCTCAGC TGCTTTCCTT GTCACAGCGG GTGCTTCCAT GACTATGTTG CAAGCCAAGG ATCAACCCGT GGACCTCCCC AAGATTCGCT CGGAAATTGT CAGCTTGATT  GAAAAGGACA ACTACTTGGG ACCTACTTTG GTCCGCTTGG CGTGGCATTC GTCTGGCACG TACAGCAAGA AGGACAACAG CGGTGGCTCC AAGGGCGGAA CTATCCGCTT TGACCCTGAA  ATCAACCATG GTGCGAATGC TGGTTTGAAC ACGGCTGTTG ACAAGCTCGA AGCGATCAAG GAACGCTACC CCAACATTTC CTACGCTGAT TTGTATGTGT TCGCTGGTGT TGTCGCCATT  GCCGAAATGG GAGGTCCTGA AGTCAAGTTC CATTTGGGCC GTAAGGATGC CGAGTCTGGC GCTGAATGCA CTCCTGATGG TCGCTTGCCC GATGCTGATA AGGGAAGCAA GCCAAACACT  ATCAACCATG TCCGTGAAAT TTTTTACCGC ATGGGATTCA ACGACCGTGA AATCGTTGCT CTCATCGGTG CCCATGCCGT TGGTCGTTGC TACCCTACGC GTAGTGGCTA CAGCGGTCCT  TGGACCCGCG CAGAGTGGAC ATTCTCCAAT GAGTACTACC GCGAACTCAT TGAAAACAAG TGGACTTTGA AGAAGTGGAA GGGTCCTGAA CAATACACAG ACCCCACTGG TGAGCTCATG  ATGTTGCCTG CTGACATGGC TTTCATCTGG GACCCCGAAT TCAAGAAGTA CGTCGAGTTG TATGCCAAGG ATGAAGAATT GTGGCACAAG GACTTCGCCA AGGCTTTCCA AAAGCTCACT 
GAAAATGGTT GCAACTTGGA AAAGAACGGC TGGCGCCGCT ACATTTTCTT CGGACCTCGT GGCGATTAG 

Retrieve as FASTA