Entry information : GbPrxQ01 (gba_locus_804_iso_3_len_915_ver_2)
Entry ID 6385
Creation 2008-10-10 (Christophe Dunand)
Last sequence changes 2015-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrxQ01 (gba_locus_804_iso_3_len_915_ver_2)
Name (synonym) GbPrxQ01 (gba_locus_804_iso_3_len_915_ver_2)
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue types Leaves
Ovule
Sporophyll
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrxQ01
start..stop
S start..stop
PabPrxQ23 357 4e-127 6..222 2..219
PabPrxQ22 351 7e-125 15..222 12..219
GbPrxQ02 313 2e-109 15..215 12..209
MtPrxQ 296 2e-103 45..222 33..212
Literature and cross-references GbPrxQ01 (gba_locus_804_iso_3_len_915_ver_2)
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Ginkgo female leaf (NYBG).
EST ref. GenBank:   EX930481.1 [5' end]   CB075491.1 [3' end]
Protein sequence: GbPrxQ01 (gba_locus_804_iso_3_len_915_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   222
PWM (Da):   %s   24080.5  
PI (pH):   %s   9.9
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARLAAAVSI SNASSFSLNT VTNAYNKPGG LIDSCPNKFV AAGESQLFGT KISTSTLCLL PKPLQSRRMI AVAKVSKGTT PPSFTLKDQD GRTVSLSKFK GKPVVVYFYP ADETPGCTKE 
ACAFRDSYEK FKKAGAEVIG ISADGPDSHK AFAKKYRLPF TLLSDEGNRV RKEWGIPGDF FGSLPGRETY VLDKKGVVQL VYNNQFQPEK HVDETLKLLQ SL 

Retrieve as FASTA  
Remarks Complete sequence from 13 ESTs and RNA seq..
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACGTC TGGCCGCAGC TGTTTCAATT TCAAACGCAT CATCGTTCTC GTTGAATACC GTCACGAATG CTTATAACAA GCCGGGTGGA CTAATCGACT CGTGCCCTAA TAAATTTGTG  GCAGCAGGGG AGTCTCAGCT ATTTGGGACA AAAATCTCTA CATCGACTTT GTGTCTCCTT CCAAAGCCTC TTCAGTCTCG GCGAATGATC GCTGTAGCCA AGGTTTCAAA AGGGACAACG  CCACCGTCGT TTACCTTAAA AGATCAGGAC GGTCGAACGG TGAGTTTATC AAAGTTCAAG GGAAAACCGG TAGTGGTCTA CTTTTATCCT GCAGATGAAA CCCCTGGATG CACTAAGGAG  GCATGCGCTT TCAGAGATTC GTATGAGAAA TTCAAGAAGG CTGGTGCAGA AGTAATAGGA ATTAGCGCAG ACGGTCCCGA TTCTCACAAG GCTTTTGCTA AGAAATACAG GTTGCCATTC  ACATTGTTAA GCGATGAAGG GAACAGAGTG AGAAAAGAGT GGGGAATTCC CGGAGACTTT TTTGGCTCGC TGCCTGGAAG GGAGACGTAC GTTCTTGACA AAAAGGGAGT CGTTCAACTT 
GTGTATAACA ACCAGTTCCA GCCTGAGAAG CACGTAGATG AGACCCTCAA GCTGCTCCAG AGTCTGTAA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTCTTCCGAT CTTGAGATTT CTGTCCTGAT CAGGTTTACG TGGTTCACAA CTTCCGGAAA CAGCGAAGTG TAGAGAGTAT TCCCTCTGAA TTCTCTTTTG TGGGCTCAGC GATCCGTCGG  ATACCATCAT TGCCATGGCA CGTCTGGCCG CAGCTGTTTC AATTTCAAAC GCATCATCGT TCTCGTTGAA TACCGTCACG AATGCTTATA ACAAGCCGGG TGGACTAATC GACTCGTGCC  CTAATAAATT TGTGGCAGCA GGGGAGTCTC AGCTATTTGG GACAAAAATC TCTACATCGA CTTTGTGTCT CCTTCCAAAG CCTCTTCAGT CTCGGCGAAT GATCGCTGTA GCCAAGGTTT  CAAAAGGGAC AACGCCACCG TCGTTTACCT TAAAAGATCA GGACGGTCGA ACGGTGAGTT TATCAAAGTT CAAGGGAAAA CCGGTAGTGG TCTACTTTTA TCCTGCAGAT GAAACCCCTG  GATGCACTAA GGAGGCATGC GCTTTCAGAG ATTCGTATGA GAAATTCAAG AAGGCTGGTG CAGAAGTAAT AGGAATTAGC GCAGACGGTC CCGATTCTCA CAAGGCTTTT GCTAAGAAAT  ACAGGTTGCC ATTCACATTG TTAAGCGATG AAGGGAACAG AGTGAGAAAA GAGTGGGGAA TTCCCGGAGA CTTTTTTGGC TCGCTGCCTG GAAGGGAGAC GTACGTTCTT GACAAAAAGG  GAGTCGTTCA ACTTGTGTAT AACAACCAGT TCCAGCCTGA GAAGCACGTA GATGAGACCC TCAAGCTGCT CCAGAGTCTG TAAAATCTGA AAATTAATTT ATATTGTTGG TAGTACCTTC 
TCATTATTTA ATTTAAGAAC ATTGGCAGTC ATGCGGTTAG TTTAATTTCA TTTTTTTTTT TAATTTAGAC CGAGG 

Retrieve as FASTA