Entry information : PiCP[P]02
Entry ID 6403
Creation 2008-11-25 (Christophe Dunand)
Last sequence changes 2008-11-25 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-05-16 (Christophe Dunand)
Peroxidase information: PiCP[P]02
Name PiCP[P]02
Class Catalase peroxidase     [Orthogroup: CP002]*
Taxonomy Eukaryota Phytophthora
Organism Phytophthora infestans    [TaxId: 4787 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PiCP[P]02
start..stop
S start..stop
PiCP02 1250 0 1..688 2..687
PcapCP02 1205 0 1..688 2..687
PsojCP03 1202 0 1..688 2..687
PraCP02 1173 0 1..688 2..687
Literature and cross-references PiCP[P]02
Literature Nusbaum,C et al., The Broad Institute Genome Sequencing Platform. The Genome Sequence of Phytophthora infestans T30-4
DNA ref. GenBank:   AATU01001356 (166064..168275)
Protein sequence: PiCP[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   688 (668)
PWM (Da):   %s   74139.14 (72129.0)  
PI (pH):   %s   4.71 (4.66) Peptide Signal:   %s   cut: 21 range:21-688
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
NVRLASLVAA FASLPRDASA GSCPFGYDSV AAVHQVDRQI SNELYDAQNC DVVDYELVKE DLLHLMTDSQ DFWPAEFGHY GGLFICLAWH CNGSYRRADG RGGCDGGRIR FNPERSWADN  TNLDKALDLL EPIKTKLGGP FCPGGDFIVP VSRRSFREQG WPLCGFCGGG RVAADGSSSL QLGPDARARR VSLPCPGDGQ CKDPLGSTTM GLIYVNPEGP MGNPDPGGSV ADVRDTFERM  AMNDRETVAL IGGGHAFGKT HGACPTGPGP DPTQDPLNPW PGNCGEGTLK GKGNNTFTSG FEGAWTFTPT KWGNGYFKGL TSLEWEKFDG PGGHVQWRPV PDTTPPVRML TADIALLHDP  SYHNISLEFA TNQTALDEEF SHAWYKLMSR DVGPVARCRG NNVPPAQPFQ NPLPPTPATL PDFGAVRSDI RSLLTTSVDG LTSDSSNDGT PYNGALCVHA AWQCASTFRI TDYAGGCNGV  RIRFLPEKDW PVSAGVDQII AALEPVKESY PTLSTADLIV LAGQVALEDA GNVTIDFVGG RTDAENGNGT EILAPRQYYN TTLIAVRDNI KILGVSPYEA VALAGRPRSV AQQKILGYSG 
SYSNNSLTLS NEYFQILLNE TWTEVSEKEF KADGKDVYMM DTDLALLAAP ELKEAVQLFA SEENVFKHVF SSAWARVMTA DHFNSSSY 

Retrieve as FASTA  
Remarks Pseudogene from genomic (2 introns). Several frame shifts. Strain="T30-4".