Entry information : LePrx43 (Solyc01g101050.2.1[2.3])
Entry ID 641
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx43 (Solyc01g101050.2.1[2.3])
Name (synonym) LePrx43 (Solyc01g101050.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx43
start..stop
S start..stop
NtPrx65-1B 540 0 5..321 13..334
NtPrx65-1A 507 0 32..321 1..294
VvPrx39 494 4e-178 6..321 5..322
VvPrx27 494 6e-178 6..321 15..332
Literature and cross-references LePrx43 (Solyc01g101050.2.1[2.3])
Literature van der Hoeven,R.S. et al., unpublished
EST ref. GenBank:   BE449807 [5' end]
Protein sequence: LePrx43 (Solyc01g101050.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (301)
PWM (Da):   %s   35175.7 (32800.4)  
PI (pH):   %s   8.56 (8.40) Peptide Signal:   %s   cut: 21 range:21-321
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKLSTLFILY FFTVSTLANA SLKIGYYHSS CPNAESIVRK AVNKAVSRNP GLGAGIIRMH FHDCFVRGCD ASILLDPTPG NPTEKEHPAN NPSLRGYEVI DEAKIELESI CPETVSCSDI  IAFAARDSAF KLGGIRYSVP SGRRDGRVSI KDEPTANLPP STLNAGELEE NFAKKGLSLD EMVTLSGAHS IGRSHCSSFS DRLYSFNSTH PQDPSMDPKL AQQLIKRCPR PSTTDPIAPL 
DVDTPNRLDN KYYLNLKNKR GVLTSDQTLW NSPSTARMAR SNAIHGANWA HKFADAMVKM GSIEVMTGIQ GEIRKNCRVV N* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1) and 1 EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAATTGT CAACTTTGTT CATCTTATAT TTTTTCACTG TTTCTACACT TGCAAATGCA TCTCTTAAGA TTGGTTACTA CCATTCAAGT TGCCCAAATG CAGAATCCAT TGTCAGAAAA  GCAGTCAACA AAGCCGTCTC TCGTAACCCT GGCCTTGGCG CTGGCATTAT CAGGATGCAT TTCCATGATT GTTTTGTTAG GGTACGTCTC ATTTTTTTAG AGAGTCAAAC AATTTTTTCT  TTTGATTTTG ATTTTGTGCG ATGAAATTAG TAAAATGTTA GTTCAACTGA CAATATCTAA CTTCATATAA ATGATTCAGG GATGTGATGC CTCAATCCTT TTGGATCCAA CTCCAGGGAA  TCCAACAGAA AAAGAACATC CAGCAAATAA TCCAAGCTTA CGAGGCTATG AAGTGATCGA CGAAGCAAAA ATTGAACTAG AATCTATTTG CCCAGAAACA GTTTCATGTT CAGATATCAT  TGCATTTGCT GCAAGAGATA GTGCTTTTAA GCTTGGAGGC ATTAGATATT CAGTTCCATC AGGTCGTCGA GATGGAAGAG TATCCATTAA AGACGAACCA ACCGCAAATC TCCCCCCTTC  CACATTAAAT GCTGGAGAGC TTGAGGAAAA TTTTGCAAAA AAAGGACTTT CTTTAGATGA GATGGTCACA CTTTCGGGTG CACATTCTAT TGGAAGATCA CATTGTTCTT CCTTTTCAGA  TAGACTTTAC TCTTTCAATT CAACTCACCC GCAAGATCCT TCGATGGATC CTAAATTAGC CCAACAATTG ATCAAGAGAT GTCCGCGTCC TTCTACCACT GATCCAATTG CTCCACTTGA  CGTTGATACT CCAAATAGGC TGGACAATAA GTACTATCTC AATTTGAAGA ATAAGAGAGG AGTGTTAACC TCAGATCAGA CGCTATGGAA CAGTCCTTCA ACGGCTAGGA TGGCGAGGAG  TAACGCGATT CATGGTGCGA ATTGGGCTCA TAAATTTGCT GATGCAATGG TGAAAATGGG ATCCATAGAG GTTATGACTG GGATACAGGG AGAGATCAGG AAGAATTGCA GGGTTGTGAA 
TTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAATTGT CAACTTTGTT CATCTTATAT TTTTTCACTG TTTCTACACT TGCAAATGCA TCTCTTAAGA TTGGTTACTA CCATTCAAGT TGCCCAAATG CAGAATCCAT TGTCAGAAAA  GCAGTCAACA AAGCCGTCTC TCGTAACCCT GGCCTTGGCG CTGGCATTAT CAGGATGCAT TTCCATGATT GTTTTGTTAG GGGATGTGAT GCCTCAATCC TTTTGGATCC AACTCCAGGG  AATCCAACAG AAAAAGAACA TCCAGCAAAT AATCCAAGCT TACGAGGCTA TGAAGTGATC GACGAAGCAA AAATTGAACT AGAATCTATT TGCCCAGAAA CAGTTTCATG TTCAGATATC  ATTGCATTTG CTGCAAGAGA TAGTGCTTTT AAGCTTGGAG GCATTAGATA TTCAGTTCCA TCAGGTCGTC GAGATGGAAG AGTATCCATT AAAGACGAAC CAACCGCAAA TCTCCCCCCT  TCCACATTAA ATGCTGGAGA GCTTGAGGAA AATTTTGCAA AAAAAGGACT TTCTTTAGAT GAGATGGTCA CACTTTCGGG TGCACATTCT ATTGGAAGAT CACATTGTTC TTCCTTTTCA  GATAGACTTT ACTCTTTCAA TTCAACTCAC CCGCAAGATC CTTCGATGGA TCCTAAATTA GCCCAACAAT TGATCAAGAG ATGTCCGCGT CCTTCTACCA CTGATCCAAT TGCTCCACTT  GACGTTGATA CTCCAAATAG GCTGGACAAT AAGTACTATC TCAATTTGAA GAATAAGAGA GGAGTGTTAA CCTCAGATCA GACGCTATGG AACAGTCCTT CAACGGCTAG GATGGCGAGG  AGTAACGCGA TTCATGGTGC GAATTGGGCT CATAAATTTG CTGATGCAAT GGTGAAAATG GGATCCATAG AGGTTATGAC TGGGATACAG GGAGAGATCA GGAAGAATTG CAGGGTTGTG 
AATTAA 

Retrieve as FASTA