Entry information : BnPrx48-1_other
Entry ID 6412
Creation 2009-08-14 (Christophe Dunand)
Last sequence changes 2009-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-08-14 (Christophe Dunand)
Peroxidase information: BnPrx48-1_other
Name BnPrx48-1_other
Class Class III peroxidase     [Orthogroup: Prx026]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx48-1_other
start..stop
S start..stop
BrPrx48-1Aa_other 765 0 1..400 1..401
TsPrx48-2 597 0 2..399 1..413
AtPrx48 552 0 5..399 11..403
AlyPrx48 547 0 5..399 11..404
Literature and cross-references BnPrx48-1_other
Literature Sharpe,A.G., Gjetvaj,B., Durkin,J., Links,M.G. and Parkin,I.A. EST resources for vegetative tissues of Brassica napus (canola).
EST ref. GenBank:   EV140441 [5' end]   EV140160 [3' end]
Protein sequence: BnPrx48-1_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   400 (380)
PWM (Da):   %s   42631.95 (40321.7) Transmb domain:   %s   i5-22o
PI (pH):   %s   5.04 (4.86) Peptide Signal:   %s   cut: 21 range:21-400
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMRFIVTCLV IALSVYVAYH GLEYDHGFIR LTKRSPGNRT GVKAPEKSPF DDNDNLISLY MEDSDQSSYS LHYDFYQDSC PTAERIITKG IRELYAAKPS VAPSLIRLLF HDCFIEGCDA  SVLLDADESL TSEKEASPNQ SLKGFDVIES IKSELEKVCP GVVSCADVLV LAAREAVLMA GGPFYPLETG Rxxxxxxxxx xxxRELPSPQ ASISVILARF GTRGFNERET VSLFGAHSIG  ITHCTFFEDR LYNFSGTGKP DPELDTGFQQ ELKTKCPYSA SAPSPGTGVG PSMPASDYGG VSSAGGNDGV VDLSYNNEGG EENFGTRYYR RLMQKKGLMY ADQQLTGREE TEMWVRAYAS 
DTQLFRRDFA MSMMKLSNYH VLTGPLGQVR TTCSKVLPKI 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. No overlap between the 5' and the 3' end. Cultivar="DH12075 (double haploid line from Cresor x Westar cross)".