Entry information : LePrx44 (Solyc10g076190.1.1[2.3])
Entry ID 642
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx44 (Solyc10g076190.1.1[2.3])
Name (synonym) LePrx44 (Solyc10g076190.1.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type Crown gall
Inducers Agrobacterium tumefaciens infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx44
start..stop
S start..stop
StPrx33 629 0 1..320 1..319
LePrx51 611 0 1..320 1..319
LePrx13 609 0 1..320 1..319
NtPrx89-1A 583 0 4..320 3..319
Literature and cross-references LePrx44 (Solyc10g076190.1.1[2.3])
Literature van der Hoeven,R. et al., unpublished
EST ref. GenBank:   BG133377.1 [5' end]
Protein sequence: LePrx44 (Solyc10g076190.1.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   35041.34 (32182.9) Transmb domain:   %s   i7-24o
PI (pH):   %s   4.84 (4.75) Peptide Signal:   %s   cut: 26 range:26-320
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSYSLVFL HVLVIMFSLT SIAFSDLSDD FYDDICPQAL PTIKSVVEDA IRQERRMGAS LLRLHFHDCF VNGCDASILL DQTDTIDSEK TARANNNSAR GFEVIDRIKS EVDRVCGRPV  VSCADILAVA ARDSVVALHG PTWEVELGRR DSTTASRTTA DNDIPTPLMD LPALIDNFKK QGLDEEDLVA LSGGHTLGFA QCSTFRNRIY DETNNIDSTF ASQRQANCPR SGGDSNLASL 
DPTPALFDSK YFSNLVSKKG LLHSDQALFS GGETDELVKT YSTNLRTFSN DFAGSMIKMG NIKPLTGNQG QIRVDCRKVN * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 10, introns 1 and 2) and 1 EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTATAGCTT GGTGTTTCTT CATGTGTTAG TCATTATGTT TTCTCTAACA AGCATTGCTT TTTCGGATTT GTCAGATGAT TTCTATGATG ATATTTGTCC CCAAGCTTTA  CCAACCATTA AAAGTGTTGT TGAGGATGCA ATAAGGCAAG AGAGGCGAAT GGGTGCCTCT TTGCTACGAT TACATTTTCA TGATTGTTTC GTTAACGTCA GTTTAATTTC TTTCTCTTCT  AGCTAGTTAA CAATGTCTGA TAATTGCTTG AGATGTTGTT ACTAATTATT GTTATAAATG CAGGGTTGTG ACGCTTCCAT TCTTCTTGAT CAAACGGATA CTATTGACAG TGAAAAAACT  GCTCGTGCTA ATAACAATTC TGCTAGAGGG TTTGAGGTGA TCGATAGAAT TAAATCAGAG GTTGATAGAG TTTGTGGACG TCCAGTTGTA TCTTGTGCGG ACATATTGGC TGTTGCAGCT  CGTGACTCCG TAGTTGCAGT AGGCATTACT CCTTTTATTT TTCCCTAACA TAACCTATAG TTAATTTAGT ATATAACTAA ACTGATAAGT ATTTTGTTAC ATTGACACAG TTACATGGAC  CAACATGGGA AGTAGAACTA GGAAGAAGGG ATTCCACTAC AGCAAGTAGA ACTACTGCTG ACAATGACAT TCCAACACCA TTGATGGACT TACCTGCACT TATAGACAAT TTTAAGAAGC  AAGGTTTGGA TGAGGAAGAC CTGGTGGCTC TCTCCGGTGG CCACACACTA GGGTTTGCTC AGTGTTCCAC CTTTAGGAAT CGCATCTACG ATGAAACTAA CAACATTGAC TCCACCTTTG  CAAGTCAACG TCAAGCAAAT TGTCCGCGTA GTGGTGGTGA TTCCAATCTT GCTTCCCTTG ATCCTACGCC TGCTCTTTTC GACTCCAAAT ATTTTAGTAA CTTGGTGTCC AAGAAAGGGC  TTTTACATTC TGATCAAGCA CTGTTTAGCG GTGGAGAGAC AGATGAGCTT GTTAAAACCT ATAGTACAAA CCTAAGGACT TTTTCGAATG ATTTTGCTGG GTCTATGATT AAGATGGGCA 
ATATCAAGCC ATTGACAGGG AATCAAGGCC AGATTCGTGT CGATTGCAGG AAGGTGAACT AA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTATAGCTT GGTGTTTCTT CATGTGTTAG TCATTATGTT TTCTCTAACA AGCATTGCTT TTTCGGATTT GTCAGATGAT TTCTATGATG ATATTTGTCC CCAAGCTTTA  CCAACCATTA AAAGTGTTGT TGAGGATGCA ATAAGGCAAG AGAGGCGAAT GGGTGCCTCT TTGCTACGAT TACATTTTCA TGATTGTTTC GTTAACGGTT GTGACGCTTC CATTCTTCTT  GATCAAACGG ATACTATTGA CAGTGAAAAA ACTGCTCGTG CTAATAACAA TTCTGCTAGA GGGTTTGAGG TGATCGATAG AATTAAATCA GAGGTTGATA GAGTTTGTGG ACGTCCAGTT  GTATCTTGTG CGGACATATT GGCTGTTGCA GCTCGTGACT CCGTAGTTGC ATTACATGGA CCAACATGGG AAGTAGAACT AGGAAGAAGG GATTCCACTA CAGCAAGTAG AACTACTGCT  GACAATGACA TTCCAACACC ATTGATGGAC TTACCTGCAC TTATAGACAA TTTTAAGAAG CAAGGTTTGG ATGAGGAAGA CCTGGTGGCT CTCTCCGGTG GCCACACACT AGGGTTTGCT  CAGTGTTCCA CCTTTAGGAA TCGCATCTAC GATGAAACTA ACAACATTGA CTCCACCTTT GCAAGTCAAC GTCAAGCAAA TTGTCCGCGT AGTGGTGGTG ATTCCAATCT TGCTTCCCTT  GATCCTACGC CTGCTCTTTT CGACTCCAAA TATTTTAGTA ACTTGGTGTC CAAGAAAGGG CTTTTACATT CTGATCAAGC ACTGTTTAGC GGTGGAGAGA CAGATGAGCT TGTTAAAACC  TATAGTACAA ACCTAAGGAC TTTTTCGAAT GATTTTGCTG GGTCTATGAT TAAGATGGGC AATATCAAGC CATTGACAGG GAATCAAGGC CAGATTCGTG TCGATTGCAG GAAGGTGAAC 
TAA 

Retrieve as FASTA