Entry information : LePrx46 (Solyc05g046000.2.1[2.3])
Entry ID 644
Creation 2006-08-07 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx46 (Solyc05g046000.2.1[2.3])
Name (synonym) LePrx46 (Solyc05g046000.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Germinating seeds
Radicles
Roots
Inducer Nutrient deficiency (Al, Zn, P, K, Fe, N)
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx46
start..stop
S start..stop
StPrx08 636 0 1..322 1..322
NtPrx18-1B 508 0 1..322 1..327
VvPrx31 491 4e-177 6..322 12..327
NtPrx62-1A 486 4e-175 1..322 1..324
Literature and cross-references LePrx46 (Solyc05g046000.2.1[2.3])
Literature van der Hoeven,R.S. et al., unpublished
Cluster/Prediction ref. UniGene:   Les.12297
Protein sequence: LePrx46 (Solyc05g046000.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 323 (302)
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
35197.98 (32874.6)  
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
8.77 (8.71) Peptide Signal: %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 21 range:21-322
Sequence
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Send to Peroxiscan
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MAFPRLIFLL VLAIIPLCNA QGLKLGYYQK TCPGAEAIVQ KITSHYISRA PTLAAPLLRM HFHDCFVRGC DGSVLLNSTK NNPAEIDAFP NQSLRGFQVI EAAKSELEQK CPDVVSCADI  LALVARDAIS LIKGPYWNVP LGRRDGKVSI MLEALFNLPP PFANITTLKA QFSSVGLNAK DLVVLSGGHT IGNSHCSSFT SRIYNFTGKG DSDPTMDANY VARLKSKCTS NNDVKTIVEM 
DPGSFKTFDG SYYSLVAKRR GLFQSDAALL DDNETKAYVK LQAMSHGSTF FKDFAESMEK MGRISVLTGK AGEIRKHCSF IN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 3 introns) and 5 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCC CAAGGCTAAT TTTCTTGTTA GTTCTTGCAA TAATTCCTCT TTGTAATGCA CAAGGCTTGA AACTTGGCTA TTATCAGAAA ACATGTCCAG GAGCAGAGGC TATTGTGCAA  AAAATAACTT CACATTACAT CTCTAGAGCA CCAACTCTAG CTGCTCCTCT TCTTAGGATG CACTTTCATG ATTGCTTTGT TAGGGTACGT AATTTAATTT GTTTTGTTTT GTTTTCATCT  CCATCTCCAT ATCCTATTAT GAGTTAGTAT AACCACTACT AGAAACAACC GGTCTTTCCC ATAGCAAATC AGTAAAAAAT TTGTGTTACA TAACATAATT GTCCACCTAA CCAGCTCACT  GGAAAAATAC TTGGTGTGAA ACAGATTGTT GACATAGTAC AAAACTTCCT AATAATTTCT TTTTATATGA AAACATTATT ATTGTTTTTT TTTTGTCTCA CCAATGTTAT TTTGAATTAC  CATGTTATTT GTTACATGTT AATTACTTAT CATAGAGATG TAACCTATAG TGTAAACATA CCATGTGTTT GTGCTCGCGC ACCCATTAAC TTTTTAGTAA TAACTTCAAC TTTTTCATAC  TTGTGACATA AACTCATATC ATTATTCCTT TTTATAAAAA TTATTTGTAC AGGGATGTGA TGGATCTGTA CTGCTAAACT CAACAAAGAA CAATCCAGCA GAAATAGATG CATTTCCAAA  TCAATCTCTT AGAGGATTCC AAGTAATTGA AGCTGCCAAA TCTGAATTAG AACAAAAGTG TCCTGACGTT GTTTCTTGTG CTGATATTCT TGCTTTAGTT GCAAGGGATG CAATATCATT  GGTAATTATT AATTAAAGAC TAATTAATTA TGTTAATAAT TAAGAAGAAA AAAGTTATTG TTAATTTTTA CATTAATTAA GGTTTTCTAA TTTTATAGAT TAAAGGACCA TATTGGAATG  TTCCTTTGGG AAGAAGAGAT GGAAAAGTAT CAATCATGTT GGAAGCCCTT TTCAATTTAC CTCCTCCTTT TGCCAATATT ACTACTCTTA AAGCTCAATT TTCCTCTGTT GGTCTCAATG  CAAAAGACCT AGTTGTTCTA TCAGGTAATA TGTATTAGGG TACTGTTAAT TGAACGGATA GAACTGAAAT TTTAATAGAT TGTATAGTAA ATTAAAAGTT GGATCATAAT TCATTCTAGT  TAACTCTTAA TTTTAACTTA TTTGTTTATT CTCTTATAAT TTGTTTATTA CTATGTTCTA CCGTTTAAAA AAGAATGATC TCCTTTTTTT TTTAGTTTGT TTAAAAAAAG AATGATCTCT  TTCTTTTTTC GGTAACATTT TCACTTTAGC TTTTCATGTG ACATGTTTAA GGTCACAAGA TTAAAGGACA ATTTTGTACA TTTGACATAA CTTTAATTTA GGACCACAAG ATTCAATAGT  CTTCTTTATT TACTTAAACT CTATTTCAAG TCAAACTAGG TCATTCTTTG TGAAACAGAT GAAGTATCTA AGAAAACAAT TTCGTTATTA TATAACATAC TAAAAAAGTT CATAAATTAA  CCAATTGCAT GTTGTTCAGG AGGGCATACC ATTGGAAATT CTCATTGTTC ATCCTTCACA AGTAGAATAT ACAACTTCAC AGGCAAAGGG GACAGTGATC CAACTATGGA TGCTAACTAC  GTTGCCCGTT TGAAGAGTAA ATGCACGTCA AATAATGACG TGAAAACCAT AGTTGAGATG GATCCAGGAA GTTTCAAGAC ATTTGATGGA AGTTATTATA GTCTTGTGGC AAAAAGGAGA  GGGCTTTTTC AATCTGATGC CGCCCTACTT GATGATAATG AGACTAAAGC TTATGTCAAA TTACAAGCTA TGTCTCATGG ATCGACCTTT TTCAAAGATT TTGCTGAATC AATGGAGAAA 
ATGGGAAGGA TTAGCGTTTT AACTGGCAAA GCTGGTGAAA TTAGGAAGCA TTGTTCCTTC ATAAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCC CAAGGCTAAT TTTCTTGTTA GTTCTTGCAA TAATTCCTCT TTGTAATGCA CAAGGCTTGA AACTTGGCTA TTATCAGAAA ACATGTCCAG GAGCAGAGGC TATTGTGCAA  AAAATAACTT CACATTACAT CTCTAGAGCA CCAACTCTAG CTGCTCCTCT TCTTAGGATG CACTTTCATG ATTGCTTTGT TAGGGGATGT GATGGATCTG TACTGCTAAA CTCAACAAAG  AACAATCCAG CAGAAATAGA TGCATTTCCA AATCAATCTC TTAGAGGATT CCAAGTAATT GAAGCTGCCA AATCTGAATT AGAACAAAAG TGTCCTGACG TTGTTTCTTG TGCTGATATT  CTTGCTTTAG TTGCAAGGGA TGCAATATCA TTGATTAAAG GACCATATTG GAATGTTCCT TTGGGAAGAA GAGATGGAAA AGTATCAATC ATGTTGGAAG CCCTTTTCAA TTTACCTCCT  CCTTTTGCCA ATATTACTAC TCTTAAAGCT CAATTTTCCT CTGTTGGTCT CAATGCAAAA GACCTAGTTG TTCTATCAGG AGGGCATACC ATTGGAAATT CTCATTGTTC ATCCTTCACA  AGTAGAATAT ACAACTTCAC AGGCAAAGGG GACAGTGATC CAACTATGGA TGCTAACTAC GTTGCCCGTT TGAAGAGTAA ATGCACGTCA AATAATGACG TGAAAACCAT AGTTGAGATG  GATCCAGGAA GTTTCAAGAC ATTTGATGGA AGTTATTATA GTCTTGTGGC AAAAAGGAGA GGGCTTTTTC AATCTGATGC CGCCCTACTT GATGATAATG AGACTAAAGC TTATGTCAAA  TTACAAGCTA TGTCTCATGG ATCGACCTTT TTCAAAGATT TTGCTGAATC AATGGAGAAA ATGGGAAGGA TTAGCGTTTT AACTGGCAAA GCTGGTGAAA TTAGGAAGCA TTGTTCCTTC 
ATAAATTAA 

Retrieve as FASTA