Entry information : GinGPx01
Entry ID 6455
Creation 2009-01-07 (Christophe Dunand)
Last sequence changes 2013-05-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-03 (Christophe Dunand)
Peroxidase information: GinGPx01
Name GinGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Glomeromycota Glomeromycetes Glomeraceae Glomus
Organism Glomus intraradices (Rhizophagus irregularis)    [TaxId: 4876 ]
Cellular localisation N/D
Tissue types Arbuscular mycorrhiza (inoculated root)
Infected roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GinGPx01
start..stop
S start..stop
BemeGPx01 216 2e-72 27..206 1..178
CangGPx01 213 2e-70 10..203 7..223
AmaGPx02 207 2e-69 51..206 1..161
AmaGPx01 207 3e-69 51..206 1..161
Literature and cross-references GinGPx01
Literature Journet,E.P., Crespeau,H., van-Tuinen,D., Gouzy,J., Jaillon,O., Niebel,A., Carreau,V., Chatagnier,O., Kahn,D., Gianinazzi-Pearson ,V. and Gamas,P. Medicago truncatula ESTs from endomycorrhizal root.
EST ref. GenBank:   AL384756 [3' end]   AL384755 [Fragment]
Protein sequence: GinGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   208
PWM (Da):   %s   23105.75  
PI (pH):   %s   8.99
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MFRNLYRVFP SSVSASTTNT TLISLKLLKS NSNSLRRSSS SQTSSLKHST MSAEVFYNLE TPDIKKNPFN FSAWKGNVVL LVNVASKCGY TPQYSGLESL YNKYKDQGLV VAGLPCNQFG 
AQEPGTEEEI VSFCSATYNV TFPLFAKIDV NGENESPVYK YLKSQQPGDI KWNFEKFLID KSGKVVKKYT SSVKPEEISS DIENLIKE 

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs and genomic. Medicago EST library.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTTCGTA ATTTGTACCG AGTTTTTCCG AGTTCCGTAT CAGCATCAAC TACAAATACG ACCCTGATCT CGCTGAAATT GTTGAAATCA AATTCAAATT CTTTACGTCG ATCATCATCT  TCACAAACTT CTTCTCTAAA ACACTCTACA ATGTCTGCTG AAGTATTTTA TAACCTTGAA ACCCCTGATA TTAAAAAGAA TCCTTTTAAC TTTTCAGCTT GGAAAGGAAA TGTTGTATTG  CTCGTTAATG TAGCATCAAA ATGTGGTTAT ACTCCACAAT ATTCTGGTCT TGAAAGTCTT TATAATAAAT ATAAAGACCA AGGTTTAGTT GTCGCTGGTC TTCCTTGCAA TCAATTTGGT  GCTCAAGAAC CAGGAACTGA AGAAGGTAAA TTTTTATTAG ATCTCAAAAG AATTTTATTG ACGTGTAAAT TTAATACTTT TATTTTTTCT CTTTTTTTAT TAAAAAAAAA AAAAAAGAAA  TTGTATCCTT CTGTTCCGCC ACCTATAATG TTACCTTCCC ATTATTTGCA AAAATTGATG TTAATGGTGA AAATGAATCA CCCGTTTATA AATATTTAAA ATCTCAACAA CCTGGTGATA 
TTAAATGGAA TTTTGAAAAA TTCTTGATCG ATAAAAGTGG TAAAGTTGTT AAAAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTTCGTA ATTTGTACCG AGTTTTTCCG AGTTCCGTAT CAGCATCAAC TACAAATACG ACCCTGATCT CGCTGAAATT GTTGAAATCA AATTCAAATT CTTTACGTCG ATCATCATCT  TCACAAACTT CTTCTCTAAA ACACTCTACA ATGTCTGCTG AAGTATTTTA TAACCTTGAA ACCCCTGATA TTAAAAAGAA TCCTTTTAAC TTTTCAGCTT GGAAAGGAAA TGTTGTATTG  CTCGTTAATG TAGCATCAAA ATGTGGTTAT ACTCCACAAT ATTCTGGTCT TGAAAGTCTT TATAATAAAT ATAAAGACCA AGGTTTAGTT GTCGCTGGTC TTCCTTGCAA TCAATTTGGT  GCTCAAGAAC CAGGAACTGA AGAAGAAATT GTATCCTTCT GTTCCGCCAC CTATAATGTT ACCTTCCCAT TATTTGCAAA AATTGATGTT AATGGTGAAA ATGAATCACC CGTTTATAAA  TATTTAAAAT CTCAACAACC TGGTGATATT AAATGGAATT TTGAAAAATT CTTGATCGAT AAAAGTGGTA AAGTTGTTAA AAAATATACT TCTTCCGTTA AGCCTGAAGA AATCTCATCC 
GATATTGAAA ACTTAATTAA GGAGTAA 

Retrieve as FASTA