Entry information : LePrx55 (Solyc01g007950.2.1[2.3])
Entry ID 653
Creation 2007-09-07 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx55 (Solyc01g007950.2.1[2.3])
Name (synonym) LePrx55 (Solyc01g007950.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx102]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Flowers
Pollens
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx55
start..stop
S start..stop
NtPrx24-1A 590 0 1..434 1..429
NtPrx24-1B 588 0 1..434 1..433
LePrx96 452 3e-157 127..434 180..487
LpPrx05 451 5e-157 127..434 180..487
Literature and cross-references LePrx55 (Solyc01g007950.2.1[2.3])
Literature van der Hoeven,R. et al., unpublished.
EST ref. GenBank:   BI933970.1 [Fragment]
Protein sequence: LePrx55 (Solyc01g007950.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   436 (412)
PWM (Da):   %s   48542.44 (46150.0) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.35 (6.24) Peptide Signal:   %s   cut: 24 range:24-435
Sequence
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Send to Peroxiscan
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MAAKVGIFAA ILLVCAILSP LLASSFPNHR PEFLEHDSGK TDVTIHGDNN NVVHANVNDI AIPCSNYETR NERSLKEKKK KKNKNKKNKK EMNHHEHDFE AFNFEHPQIE GVRHGYPQVF  PEHNVDPITK EHEEPEILEG LREGFYQNTC PQAEEIIRNG LIRAFQNDST IAAAIPRLFL HDCFVKGCDG SILLDTTPTG GKIEKLSPSN GITVKGFELI DEIKAELEEN CPGIVSCSDV  LAYLSRDAFV ASGLPHYEVS GGRRDGMESR VENVVGNLPL PDDTVDQMIQ LFNRKGLNAE DLVVLIGAHS IGVAHCFNFL YRMDTPEKAQ MVDPRLGNVM KFTCTGQMST IAFDATTQYK 
MDSVFYKQLL MKKGLLESDQ ALTQDIRTRG LVQRFSNDEV GWFNKFGVAM NKLGAVEVLT GNQGQIRKQC RAVNL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, intron 1) and 1 EST. Incorrect prediction from Phytozome: Fusion between two ORFs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCTA AGGTTGGGAT TTTTGCAGCT ATTTTACTAG TTTGCGCGAT TCTATCACCT CTGCTAGCCT CATCATTTCC AAATCATCGT CCTGAATTTC TAGAACATGA TTCTGGTAAG  ACAGACGTAA CGATCCATGG TGATAATAAC AATGTTGTTC ATGCCAATGT CAATGACATC GCGATTCCTT GCTCAAATTA TGAGACAAGG AACGAAAGGT CCTTGAAGGA AAAGAAGAAG  AAGAAGAACA AGAACAAGAA GAACAAAAAA GAAATGAACC ATCACGAACA CGATTTTGAG GCTTTCAATT TTGAGCATCC CCAAATAGAA GGTGTCCGCC ATGGATATCC ACAAGTTTTT  CCTGAACATA ACGTAGATCC GATTACTAAA GAACACGAAG AACCAGAGAT TTTAGAAGGA TTGAGAGAGG GTTTTTATCA AAATACATGT CCTCAAGCAG AGGAAATCAT CAGAAATGGC  CTAATTAGAG CCTTTCAAAA TGACTCTACT ATTGCTGCTG CCATCCCTAG GCTTTTCTTA CATGATTGCT TTGTCAAAGT AAGTTCTCAC TTATATGCAA TTATTCATAA ATTCTAAAAA  AAATATTTGG CACGACGAAA AATATTTTCA AGTGTTTGGT TAGAGAGAGC GAAGAATTGA TAAGTATATT AGCATTCAAG AGAATTGATG AAGAAAAGTA AATGAAAAAT AGTTTAGGAC  AACCAAACAC TAGAAAAATG ACTTTTATCT TTCGAAAAAT GTTTCTTATT TGCAACCATG AAAATAGAGT TTAAGTTTCA TACACAGACG ATATGTAAGA AGTATTTAGG TCATCTAAAT  GACAACTTAA GACTTGATAA AAATTACCAA CATGGGTTGT GGTGCACTGG TTGTGGGAGT GTTTCACCCT TAAACCAGAG GTCTCAGGTT CGAGCCCTGA GTATGGAGAA AATCCTGTTG  GGAGCGTCAT CCCCTAATAG GCCCTGCAGT GCACGATCCG GGATCCGGAT TTAGTCGGAG CCTGGGTATG GAGAAATCCT GTTGGGAGCG CCACCCCAAA TGAGCCCTGC AGTGCGCGAT  CCGGATTTAG ACGGAGCTCC AATGTAGGGA GAAAATCCTG TTGGGAGCGT CAGGAGTCCG GATTTAGTCG GAGCTCCAAT GTGTGGAGAA AATACTGTTG GGAGCGCCAT CCCCAAATGG  GTCGTGCAGT GTGTGATCCA AATTTAGTCT GAGCTCCAAT ATGAGGCTCC GGACACCGAG TGGAAAACCA AAAATTAAGA CTTGATAAAA GTTCATTGAT AACTTACTAC TAAAACATAT  GAAATTACAT AGATGATCGA TCATGATTCT TTTTATACTG TCAGTGTATG TAACTTATCG TATATACAGG GTTGCGATGG ATCAATATTG CTCGATACAA CACCAACCGG TGGGAAAATA  GAGAAGTTAT CACCGTCAAA TGGTATTACA GTCAAGGGAT TTGAACTCAT TGACGAGATC AAAGCAGAAC TCGAAGAGAA CTGCCCAGGC ATTGTCTCGT GCTCTGATGT TTTAGCCTAT  TTATCTCGTG ACGCCTTTGT TGCATCGGGA CTCCCCCATT ACGAGGTGTC TGGTGGCAGA CGTGACGGCA TGGAATCGCG CGTAGAAAAC GTCGTTGGCA ACCTCCCATT GCCTGATGAC  ACAGTAGACC AAATGATTCA ACTTTTCAAC AGAAAAGGCC TAAATGCAGA AGATTTAGTT GTCTTAATTG GTGCACACTC CATTGGAGTA GCTCATTGTT TCAACTTTCT TTATCGAATG  GACACACCCG AGAAGGCACA AATGGTTGAT CCGCGACTTG GGAATGTTAT GAAATTTACA TGTACTGGAC AAATGAGTAC AATAGCGTTC GACGCAACAA CACAATACAA AATGGACTCA  GTATTTTACA AGCAATTGTT GATGAAAAAA GGTTTACTCG AATCCGATCA AGCTTTGACA CAAGATATAA GAACAAGGGG ACTTGTCCAA AGATTTAGCA ATGATGAAGT GGGGTGGTTT 
AACAAATTCG GCGTGGCCAT GAACAAGCTT GGGGCGGTAG AGGTGCTCAC CGGAAACCAA GGGCAAATCA GGAAACAATG TCGAGCTGTT AACTTATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCTA AGGTTGGGAT TTTTGCAGCT ATTTTACTAG TTTGCGCGAT TCTATCACCT CTGCTAGCCT CATCATTTCC AAATCATCGT CCTGAATTTC TAGAACATGA TTCTGGTAAG  ACAGACGTAA CGATCCATGG TGATAATAAC AATGTTGTTC ATGCCAATGT CAATGACATC GCGATTCCTT GCTCAAATTA TGAGACAAGG AACGAAAGGT CCTTGAAGGA AAAGAAGAAG  AAGAAGAACA AGAACAAGAA GAACAAAAAA GAAATGAACC ATCACGAACA CGATTTTGAG GCTTTCAATT TTGAGCATCC CCAAATAGAA GGTGTCCGCC ATGGATATCC ACAAGTTTTT  CCTGAACATA ACGTAGATCC GATTACTAAA GAACACGAAG AACCAGAGAT TTTAGAAGGA TTGAGAGAGG GTTTTTATCA AAATACATGT CCTCAAGCAG AGGAAATCAT CAGAAATGGC  CTAATTAGAG CCTTTCAAAA TGACTCTACT ATTGCTGCTG CCATCCCTAG GCTTTTCTTA CATGATTGCT TTGTCAAAGG TTGCGATGGA TCAATATTGC TCGATACAAC ACCAACCGGT  GGGAAAATAG AGAAGTTATC ACCGTCAAAT GGTATTACAG TCAAGGGATT TGAACTCATT GACGAGATCA AAGCAGAACT CGAAGAGAAC TGCCCAGGCA TTGTCTCGTG CTCTGATGTT  TTAGCCTATT TATCTCGTGA CGCCTTTGTT GCATCGGGAC TCCCCCATTA CGAGGTGTCT GGTGGCAGAC GTGACGGCAT GGAATCGCGC GTAGAAAACG TCGTTGGCAA CCTCCCATTG  CCTGATGACA CAGTAGACCA AATGATTCAA CTTTTCAACA GAAAAGGCCT AAATGCAGAA GATTTAGTTG TCTTAATTGG TGCACACTCC ATTGGAGTAG CTCATTGTTT CAACTTTCTT  TATCGAATGG ACACACCCGA GAAGGCACAA ATGGTTGATC CGCGACTTGG GAATGTTATG AAATTTACAT GTACTGGACA AATGAGTACA ATAGCGTTCG ACGCAACAAC ACAATACAAA  ATGGACTCAG TATTTTACAA GCAATTGTTG ATGAAAAAAG GTTTACTCGA ATCCGATCAA GCTTTGACAC AAGATATAAG AACAAGGGGA CTTGTCCAAA GATTTAGCAA TGATGAAGTG 
GGGTGGTTTA ACAAATTCGG CGTGGCCATG AACAAGCTTG GGGCGGTAGA GGTGCTCACC GGAAACCAAG GGCAAATCAG GAAACAATGT CGAGCTGTTA ACTTATAA 

Retrieve as FASTA