Entry information : Ptro2CysPrx[P]01
Entry ID 6552
Creation 2009-02-16 (Christophe Dunand)
Last sequence changes 2011-08-12 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-08-12 (Christophe Dunand)
Peroxidase information: Ptro2CysPrx[P]01
Name Ptro2CysPrx[P]01
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type Abomasum
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ptro2CysPrx[P]01
start..stop
S start..stop
Hs2CysPrx[P]01 384 9e-139 1..198 1..198
Pabe2CysPrx[P]01 363 2e-130 1..198 1..198
Pabe2CysPrx01 360 2e-129 1..198 1..199
Mnem2CysPrx 360 2e-129 1..198 1..199
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 13312802..13313398 597  
complement(join(13312802..13313398))


exon

Literature and cross-references Ptro2CysPrx[P]01
DNA ref. GenBank:   NC_006476.2 (13313398..13312807)
Protein sequence: Ptro2CysPrx[P]01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   198
PWM (Da):   %s   21854.9  
PI (pH):   %s   6.11
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSGNAKIGH PAPNFKATAV MPDSQFKDIS LSDCKxKYVV FFFYPLDFTF VCPTEIIAFS DxEEFKKFNC QLIGASVDSH FCQLAWIHTP KKQGGLGPRN IPLASDPKCT IAQDYGILKA 
EEGISFRGLF IVDDMGILWQ ITVNDLPVDC SVDETLRLVQ AFQFTDKHRE VCPASWKPGS DTIKPDVQKS KEYFSKQK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 9, no intron). No EST. Two missing residues ("n") => frame shift in the genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAG GAAACGCTAA AATTGGGCAC CCTGCCCCCA ACTTCAAAGC CACAGCCGTT ATGCCAGACA GTCAGTTTAA AGATATCAGC CTGTCTGACT GCAAAGGnAA ATATGTTGTA  TTCTTCTTTT ACCCGCTTGA CTTCACTTTT GTGTGCCCCA CAGAGATCAT TGCTTTCAGT GATACnGAAG AATTTAAGAA ATTCAACTGC CAACTGATTG GTGCTTCTGT GGATTCTCAC  TTCTGTCAGC TGGCATGGAT CCACACCCCT AAGAAACAAG GAGGACTGGG ACCCAGGAAC ATTCCTTTGG CCTCAGACCC GAAGTGCACC ATTGCTCAGG ATTATGGGAT CTTAAAGGCT  GAAGAAGGCA TCTCATTCAG GGGCCTCTTT ATCGTTGATG ATATGGGTAT TCTTTGGCAG ATCACTGTAA ATGACCTCCC TGTTGACTGC TCTGTGGATG AGACTTTGAG ACTAGTTCAG 
GCCTTCCAGT TCACTGACAA ACACAGGGAA GTGTGCCCAG CTAGCTGGAA ACCTGGCAGT GATACTATCA AGCCTGATGT CCAAAAGAGC AAAGAATATT TCTCCAAGCA GAAGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCAG GAAACGCTAA AATTGGGCAC CCTGCCCCCA ACTTCAAAGC CACAGCCGTT ATGCCAGACA GTCAGTTTAA AGATATCAGC CTGTCTGACT GCAAAGGnAA ATATGTTGTA  TTCTTCTTTT ACCCGCTTGA CTTCACTTTT GTGTGCCCCA CAGAGATCAT TGCTTTCAGT GATACnGAAG AATTTAAGAA ATTCAACTGC CAACTGATTG GTGCTTCTGT GGATTCTCAC  TTCTGTCAGC TGGCATGGAT CCACACCCCT AAGAAACAAG GAGGACTGGG ACCCAGGAAC ATTCCTTTGG CCTCAGACCC GAAGTGCACC ATTGCTCAGG ATTATGGGAT CTTAAAGGCT  GAAGAAGGCA TCTCATTCAG GGGCCTCTTT ATCGTTGATG ATATGGGTAT TCTTTGGCAG ATCACTGTAA ATGACCTCCC TGTTGACTGC TCTGTGGATG AGACTTTGAG ACTAGTTCAG 
GCCTTCCAGT TCACTGACAA ACACAGGGAA GTGTGCCCAG CTAGCTGGAA ACCTGGCAGT GATACTATCA AGCCTGATGT CCAAAAGAGC AAAGAATATT TCTCCAAGCA GAAGTGA 

Retrieve as FASTA