Entry information : PtroGPx05
Entry ID 6573
Creation 2009-02-05 (Christophe Dunand)
Last sequence changes 2010-11-23 (Myriam Duval)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-12-28 (Christophe Dunand)
Peroxidase information: PtroGPx05
Name PtroGPx05
Class Animal glutathione peroxidase    [Orthogroup: Gpx1001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroGPx05
start..stop
S start..stop
HsGPx05-A 452 5e-165 1..221 1..221
MmulGPx05 446 1e-162 1..221 1..221
MfaGPx05 446 1e-162 1..221 1..221
MmGPx05 358 1e-127 1..220 1..220
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29038287..29038373 87 N° 2 29041685..29041838 154 N° 3 29044119..29044236 118 N° 4 29044662..29044761 100
N° 5 29046302..29046505 204  
join(29038287..29038373,29041685..29041838,29044119..29044236,29044662..29044761 ,29046302..29046505)


exon

Literature and cross-references PtroGPx05
Literature Birren et al., Chimpanzee Sequencing and Analysis Consortium. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437 (7055), 69-87 (2005).
DNA ref. GenBank:   NC_006473.2 (29038287..29046505)
Protein sequence: PtroGPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221 (198)
PWM (Da):   %s   24927.86 (22366.4)  
PI (pH):   %s   8.68 (8.58) Peptide Signal:   %s   cut: 24 range:24-221
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNAP*EELKPYGLVVLGFPCNQFGKQEPGDNKEILPALKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 4 introns)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCTCCTAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGGTGAGTGAGCTTCAGAGAGGGCATGGTAGTTAC
TCTTCTGTCCTACTTCTAGACCCTGCCCTCCACTCCTTCTTGTAAGACTCCAACTCCTGCTTTCTTCTTCTTTGCCAGTTCCCCTAAACCTTGCTTTTTTTTCTCCTTGAATCTTCTTCA
TTCCTATGGATGGGTATTCCTTGCGTTGAATATGACTAGGGAAGAAAGGGTCTCCATATGACTAGGGAAGAAAGGGTCTCCATACCTTCTTCAGGTGGAGGTCCCCTGGAGACCTCTCTG
GCCACATCAGTCTCTGCTTCAGAGCTGGGTCTGAGGCTGGGACAGCGGTGGGCTTTAGAGTAGGTGGGGACTGGGGTTTGGAGGAGAAGCTGAGTGGACTTGTCTCAGACACAGCTCAGC
AACAACCCCTTGAAGAGGAGGAAAAAACGAATGTGGAAGTTTTAAGGATGGATAAAGTCAGAGAGTTATCAGAGAAACATAAAACATGAAAAAAAAAATCAGAGCCCTAAAACAACTGGA
TTTGGAGTCAGGCATCTTGGATTCTGGCCTCAGTTCTACGCCCAATTCATGGCTCGTTACCTTATTGATAAGACACATGTGTCTGGCAGCAGAAGGGGCAGTTTAGGAAAGGATAATAAT
GAATGCGATAACTTGGAGGCAGAAAATAATCATGAAGTTAGGTAAAGGCAAACTTTCATTTACATAATGGGTTACCACTTTTGACTTTGGACAAATTAACCTCTGTTATCTCATTGTAAA
TTTATGGGTAACAGTAACTACCTTATGGGTGGGTGAATAACAATTATTATGCATATAATACATTCTACAAAATGCAGTTCTAATAACATCTCCCCATCCCTCGCCTCTAAAATTAACTAG
ATAACATCCTGGGTGAACTTCTATTTTGAGAATTGATATGGTTTTTATGTTACCTGTGGTGCTTAATTGAGTGTGGAGACTCTGGGCTGCAGAATTTGCTTAATAAAAGCTGCGTCTAGA
GATAATTGAGACACGTTATGTGGACTTCAATAAATTTGAAACAGCAGTCAATATCAGAAGTAAACTGGACTAAAGGAAGTCTTCAAATTGAGAGTCTCTCTAAGCTTTTGCATACTGGTA
CCCAACATGACTGTGAGTGATTGTCATTGCAGTAGCAAAAGAAAAAAAAAAAGGCAAATTCTTGCAAATGTTTAACTTGAAACTAGGTAACATGGAGATAGAAACAGATACTTTTACACA
ATATTCTCTTTATAGATCCCTCAATTTTGCTGGTGCATGTATATGTGTATAAATTTAGGGAAAGGTGTAAAAACCTGCATAGAAAAATATCTTTTTCCTCAAGAGTAAGAAGTGAGTAGC
TACAACCTAGTATGCTGGTGATAAAATCAGTGGGATAACAGGACTAGAAAAAAGTTGTGTTTTGTTTTGCTTTGTTTTGCATTACTCCTTCTCTGAATGGGGGGCAGATGATGTTCAACC
AAAATCCTTACTAGACTACTGCATTTCCAGGAAGTCTAGTTTAATCCTAGTTTGTCTGGACATTCCTTATCAAATAACGCCCTTCTCTCTTTTCTCCAGCCAGTTCCTTTCCACCTTTTT
CTCACCGGATGGTTTGGACATAGAGCTTCCTTTTCATATTCCTGTCATATATATTCTGTATTCCATGAGCAATTTGTGGCAGCTTCCCCAGTATAAGAAAAGGGATCAGCATGTGCTGGT
GAGCACTGTGGCATCGGTACACTTGGGGTACTGCATGAACACTGTAAGGGTAGAGACAGAGGAGGAGTAAGATGAGACCTGCCTTGTAGAGGAATTTAATAAAAGAACATGCAATGAGAA
TTTCAGGCAGGACTAATTTGTATTAAGTGGAACTTAACAAATGTTGCATGGAAGTCTGCTCAAATATTAATATGTTCATGAGATTTGAGAAGGAATGGGATAGGTGGAATGGAGGATGAA
AGTGGATATTAGACACCTAGAGCACAATGGGCTGATGAGCTGGGTGATGCTGCCCAACAAATTTCAGGGACTCACTTGCAGATGGACTTTAGGGTTCTCCATCTCCTTTCTTGAGAGCTA
CCAAAAGCTGGGATTTCGGAGTATTGGCTTACATGACCACCATGTTAGTAAGAGAGTGACAGGAGAAATTTATTCAAGGTGGGGATAATATTCGATTCTAGAATGTTAAACATGGAAGCC
CACTTGGAGTTCTAGTAAGAATCTAGATAAATATCTTCATTTTACTCATGGGGAAACTGAAGGCCAGGGATGGGAATTGCCCAGGTTCACAAAGGAATTTAACAATGGAGCTGGCTTCTG
ATTCCCAGGGCAGTGTTCTTTCTACTCTACCTGCTGATGAGTGGAGTAAGAGGTCAGAAGACCTGGGGAAAGATAAGCAACTAAGATATCCTAAAAATAGTTCAGCAATTTAAAACCCTC
CCTTCTCAGAGAGTCCAGACAGGAGGCCTTCAATCCAGAGCCAAGGAGTAGCCTGTTTTTTACAGAAGCATGTAAGGCAAGTGTGCTTTTCTCTTCGGCCCCACTTACTTCCAGCTCCTA
CCATCCCAGCTTATGAATCAATATCCTTTTCCATTATCCGTGTATTTCCTGGTATCTCACATCTTTCAAAATAATAGGAAACTTGATTCTTATGTGTGTGTGTGGAGGGGGGAGTGTAAA
TAGTAAGTGTGTATATATATGTATATATATATGTATGTATATATATATGTATATATATATATATATATGGTACAAGAGATGTTTTGATACAGACATGCAATGTGTTATAATCACATTATG
GAAAATGAGGTATCCATCCCCTCAAGGATTTCTCCTTTGTGCTGCAAACAATCCAATTATATGCTTTTAGTTATTTTAAAATGTACAATTAAGTTATTATTGACTATAGTCACCCTGTTG
TGCTATCAAATACTAGGTCTTATTTATTCTTTCTAACTATCTTTTTTTTTTCTCATTAATCATCCCAACCTCCCTTCCACCCTCCTAGTATCTTTCCCAGCCTCTGGTAACCATCCTTCT
ACTCTCTATCTCCATGAGTTCAATTGTTTTGATTTTTAGATCCCACAAATAAGTGAGAACATGCAATGCTTGTCTTTCTCTGCCTGGCTTATGAGACTTGATTTTTTATTTCCAAGTTAC
AAGAACCAAGTTTCAGTCTTGTCATTGACACTTTAGACAAGTCTTATTTGTTTTCTAGATCTTGGTTAGAACATAACTATTCTTTGACTTCTTTGAAAGATTACACAGATGCCAGGAATT
ATTGTTACCAGTATTATCACTTAAAAAAAATCTTCCAGATGGATTGCCACAAAGACGAGAAAGGCACCATCTATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCA
AGCAGTATGTGGGCAAGCACATCCTCTTCGTCAACGTGGCCACCTACTGTGGTCTGACAGCGCAATATCCTG
GTAAGAGAATTCATAGTTACTTCTCTTTGGGACTAAATTTTCCAGCTG
ATCATATTCTAAATTATACTTGGAATTATATTTTAATTATAATTATGTACCAAAATAAATACTCATAATCAAGTGACTTCATCCCCCATATCAGAAGTCAGCAAGCTTGGGCGGACAGGC
CAAATTTGGTCAGCCTGGCTTTGTTAACAAAGTTTTATTGGAATGCAGCCGTCCCCGTTCATTTACACATCACCTATGGCTGCTTTCATGCTGTAAAATAGAGGTTAGTAGTTGTAGGAG
TAGTGATGAAGGAAACCATGTGGCCCACAAAGTCTGAAATATTTCCTATCTGGCCCTTTACAGAAAAAATGTGCTAACCCCTTCCCCATGCCCTGCCTCTGCTTTTTCCTGAGATTTCCA
GGGGAATCAATATATACTTGAGAACTAGGAGCCTCTCAGAAGATTCCAGAAGTCTTCTTGGTAAATACAGGACAGAAGACCCATGTTTTTGAGACTTTTGCAAGGTTTTACAGGTAACTT
ACAATGACAAGAATAAGGAGTTTTATACCTGGAACTGCATTTGATTAGAGTGAGGGCTGGCGGATGAGGCTGTAATAGAAGCAAATACTCCCTCTCCAACCTCAACCCCTTTTTAGGATG
TAGTTTTTCCTCCCTTTTTGTACATTATTCAGGGAAGAATTTTCTCATATTTTAGGGCATGTGGTTTAAAAATCAGTGAATAACAATCAGGATGGATTATACCAGAGACAAATGTACTTC
TTATATTTGAAGTAATAAGACCTTCATTTTTTGTTTTTAATTATGTTTTGAATAAGCATTATATTCACAAGTCTCAAAGTTCAAAAGAAAAAAACTTTAGAACCAAAGGTTTCCACCTTC
TTCCCCTCCCTTCAGTAGACCAATATTATCTTGTTTACAGAATACATAGATATTCTTTTTTCTGCTCCCCCCTCCCCAGCTGATAACACACAATAAATACTATTTGCTGCCTTGATTTTT
TAATTAATAAAATACATTTGAGTTCAGATCATTTCCTCATTCTTTCTTAAGACTGAATAATATTTATTGGACCACAATTTATTTTCCCAGTTTATAGGGACTTTAAGAATCGATTTATTC
AGTTTCCACCCTGCGAATAACAGATAACAGAAGGACATAGGGAGGGGTACTGAGGAACCCTGTGAAAACAGGAAGGCAATCTCTGTTTTTTAAAAGGGCCTAGAGGAGGTACCAGTTGGC
TGAGCTGAATCTGAGTGGGACTGGTTAGTGTTTGTCAACGGACTAAAGGCATCTGGCTCAGAAAGGGTTAACAAAGAAGATGATTATAAAAGTCTGAGCAGACAAGTTGGAAAACTTCCT
GGTAGTGGACGAAGGCAGCTGAAGCTTGTTTTTCAGCATATCACTGAGGATTTTTAGGAAGAATGCATCTTCAGCATCTTAAGGACTGTTGAAAAATGTTAGGATTGTTGATTTCAAATT
TCTCTGTTTGTCTTTGCCTTTGTCAGTTTTACTTCCACTCCACTCAGGGTGAGCCAGGCTGCACAGAGGAGAGAAGCTCAGTCCTCATTGTCTGTGTCTGTTCCTTTAAAAAAGAAAGAT
TCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGCGAAACCCCGTCTCTAC
TAAAAATACAGAAATATTAGCTGGGCATGGTAGCAAGTGCCTGTAGTCCCAGCTACTCGGGAGTCTAAGGCAGGAGAATCACTTGGATCTGGGAGACGGAGGTTGCAGTGAGCCGAGATC
GCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGAATCTGTCTCAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAGTCACCTGTTGAACTCTTGAATAATAAAGATGACTAA
GCCCCATTTCAGAGGAACAGAAAACTCTCTGAAATGGGACCTGGGCATCCCTATTTTTAGGAACGGGCCTTCAGCTGATTCTGATGTGCTGCAGGTATGGAAAACACTGCACCATGACAA
AGGGCTTTTGAGTGCACGTCTGAAGATCCGGCCTCTAACTTCAGCTATGCTACTAACAGCCCTTCTGATGCAGAGCTGTTTCCCTCCCTGGGCCTCTGTTTCCTTCTCTGTAAAATGGGT
AATCCCAGGGAATCATCCTTGCACAAGGCAGAACCTCTACCCAGACCAAAATTGTTCCTCCTCTAACTGCAGAACTAAATGCACCCTAGGAGGAGCTGAAGCCCTATGGTCTAGTTGTGT
TGGGCTTTCCCTGCAACCAATTTGGAAAGCAAGAACCAGGAGATAACAAAGAGATTCTTCCTGCGCTCAA
GTAAGTGTCTTCTTGAAATCCAATAGGAGGCGCCTGTGTACCTTTCCTCA
GTCTCCAGAGGCCCTTCCAGCTCAGGAACTTTCTGGGGAGGTATGGATTAATAGGCTCAGGAGCATTACAAGCAGAGTTTAACTTTGGCCTACCGTGATGAGCGTCTGGCAGTTTCCAGA
CTCTCTCTCCATCCCTGGCTGAGACTTGGATGGCCTATGGAGGACAGAAGGGATGGAGGAAAAGAGACAAGTCATGGGATAGAGAGAAATAAAGTGAGTCAGAGAGCCCAAAGTCAAAAC
ATGGCCATATTCCTCCCCACCCACAACGATACTTCCCTCTTTCTCTCCTTTCTCATGACTTCAAATCCTAGTGTCTCATTATAATCTTTACTTGCATATCCTGGAGCTTCCTGGGAACAT
TATGGCTTGTTGCAGGTATGTCCGTCCAGGGGGAGGATTTGTACCTAGTTTCCAGCTTTTTGAGAAAGGGGATGTGAATGGTGAAAAAGAACAGAAAGTCTTCAGTTTCTTGAAGGTGAG
TAAATTCCTGGCATAAGCCTCCTCCTCTTTTCTAATATTCCTAACATAGAGTTGATGTGGCAGAAATGGATCCAAGGGCTCATGCCCAGTGGTGGGATTGGTCTTTGTGGAGAAAAATCT
CCAGATCAGCATTCCCCATTGCACATGCTGATCTGGAGATTAATCTGTGAGTATCTATGGGGCTCTAACTTTGTGTGGTGAAGAGAGTTGTGTGGAATGGCAACTTTTACTAGGACCACC
CTCTTTTGCTCATTGACATTCATTCATTAATTCATTCCAGGAACACTTGATGAATGCCCGCTATTTATAAAGCAAACTAAATAATAAGGATATAAAGATGAATAAGGCATAGTCTGTACC
CTTGATGAGTTTATAATGGAGAGAGAGTTAGAAACCATTAGCTATATAGCTGGGGTGGTGGTTCATGCCTATAATCCCAGCACTTTGGAAGACTGAGGCAGGACAGGAGAATTGCTTGAG
GCCAGGAGTTCAAGACTAGCCTGAGCAACATCGTGAGACCCTGCCTCTACAAAACAAATCAAAAAATTAGCTGGGTGTGGTGGCACGTACCTGTAGTCTCAACTACTCGGGAGGCTGAGG
CCAGAGGATTGCTTGAGCTCCGGAGCTGGAGGCTGAAGTGAGCTATGATTGTGCCACTGCATTCCACACTAGGCAACCAAGCAAGACACTGTCTCAAAAAAACAAAAACAAAAAAAGTAA
CAAACCAACAGGTATGATACAGTGTAGTAGGTACCTTTTATGAAACACTGATTTTTAGACATAGAGAATGCCAGAGCTGAAACAACCCTAAAGATTACCAAAGTGAATTGTTCCTAAATG
CTGGACTGTGAACCAAGACCAGTCCATGTTAAGACTTTATATATCCTCAATAAATTGAAGACAATAGAACAGTGTATCATGCCTCTGCACCCCACCCTGGGCGACACAGCGAGACTCTGT
CTCAAAAACAAAAACAAAAAAGAACATTGTGGGAAGTTTTTTATAAACTCAACTCGTCTAACTTATAGGACTTCCCTTTATTCACAAATTATGACCCACACGCAGTTTATTCTTCCAATG
GTCTTTTTAAATTAAGTGACAAAATGATGGTGTTTTAAAAATTTTTGTTATTTGACAAAATATTAGTAATTCAGTGTTGGTCCCAAAAGACAATTATTGAAATATTAGTGGCCCATGGAA
CCCTAAGACCTGGAAAACCACATTCCAATCCAAGCTATTTACTTTGAAGAAAAGGAAACCAAAAGCATAAAAGGTAACATGTCTTATCCATGGCAGCAAAATTTTGTGATGGGGCTATGG
GGAGAAACTGAAAGAGAGCAGATTTTGCTATAATATCTATAATATTCTTGGTAGTTGGCATAGTGGTGATTCAAGAATCTATGGAGTTTTTTAGGAATATCAGGAAGTTAAAATATCTAG
GTATAGGAAGGGGTGGATTACCTGTGGGTAAAAATAGCCTGGATCATCCAGGAGCAGAAATAACATTGTTTCTCTTTTCCATCTCTCTGCTTTAGCACTCCTGTCCTCATCCCTCTGAGA
TTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAACTTCGAAAAGTTCCTGGTGGGGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACCGGG
CTACGGTCAGCTCAGTCAAGACAGACATCCTGGCGTACTTGAAGCAATTCAAAACCAAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCTCCTAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGATGGATTGCCACAAAGACGAGAAAGGCACCATC
TATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCACATCCTCTTCGTCAACGTGGCCACCTACTGTGGTCTGACAGCGCAATATCCT
G
AACTAAATGCACCCTAGGAGGAGCTGAAGCCCTATGGTCTAGTTGTGTTGGGCTTTCCCTGCAACCAATTTGGAAAGCAAGAACCAGGAGATAACAAAGAGATTCTTCCTGCGCTCAAG
TATGTCCGTCCAGGGGGAGGATTTGTACCTAGTTTCCAGCTTTTTGAGAAAGGGGATGTGAATGGTGAAAAAGAACAGAAAGTCTTCAGTTTCTTGAAG
CACTCCTGTCCTCATCCCTCT
GAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAACTTCGAAAAGTTCCTGGTGGGGCCTGATGGAATCCCTGTCATGCGCTGGTCCCAC
CGGGCTACGGTCAGCTCAGTCAAGACAGACATCCTGGCGTACTTGAAGCAATTCAAAACCAAA

Retrieve as FASTA