Entry information : LePrx60 (Solyc07g049240.2.1[2.3])
Entry ID 658
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx60 (Solyc07g049240.2.1[2.3])
Name (synonym) LePrx60 (Solyc07g049240.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type Callus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx60
start..stop
S start..stop
LePrx02 636 0 1..331 1..329
StPrx21 568 0 1..330 20..347
LePrx105 566 0 1..330 1..328
LePrx15 565 0 1..330 1..328
Literature and cross-references LePrx60 (Solyc07g049240.2.1[2.3])
Literature Alcala,J. et al., unpublished
EST ref. GenBank:   AW218512.1   AW622066.1 [Fragment]
Protein sequence: LePrx60 (Solyc07g049240.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (306)
PWM (Da):   %s   35781.37 (33160.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.91 (9.04) Peptide Signal:   %s   cut: 26 range:26-331
Sequence
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Send to Peroxiscan
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MAKFGDLGNL LVLCILLGIV GSSYGQLQLN FYAKSCPQAE KIIQDYVYKQ IPKAPSLAPA LLRMHFHDCF VRGCDGSVLL NFTSSTKNQT EKVAVPNQTL RGFSFIDGVK KALEAECPGV  VSCADIVALV ARDSVVVTGG PYWKVPTGRR DGRISNASEA LANIPPPTSN FSSLQTSFAS KGLDLKDLVL LSGAHTIGVS HCPSFSSRLY NFTGVWGKKD PSLDSEYAAI LKMKKCKSIN 
DNTTIVEMDP GSSSKFDLSY FQLVLKRRGL FQSDAALTTS ATTKSFINQL VQGSLEQFYA EFGVAMEKMG KIEVKTGSAG EIRKHCAVVN S* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 3 introns) and 2 ESTs
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTAAAT TTGGCGATTT GGGTAATCTT CTAGTGTTGT GTATACTACT AGGAATAGTT GGTTCTAGCT ATGGTCAGTT GCAGCTCAAC TTCTATGCAA AGAGCTGTCC GCAAGCAGAA  AAGATAATTC AAGATTATGT GTATAAGCAA ATCCCAAAGG CTCCGTCTCT TGCACCTGCG TTGCTCAGAA TGCATTTCCA CGATTGCTTT GTCAGGGCAA GTATATACCT CATTTTATGA  AGAGTGCAGT TCTTAAAGTG ATAATTCTGA TTTTATTTTA TTGGGTTCTT AACAGGGTTG TGATGGTTCT GTACTCCTGA ATTTCACTTC GAGCACTAAA AACCAGACTG AAAAAGTGGC  TGTTCCTAAT CAAACGCTGA GAGGCTTCTC ATTTATCGAT GGTGTGAAGA AAGCATTGGA AGCTGAATGC CCTGGAGTTG TGTCATGTGC GGATATTGTT GCCTTGGTTG CTAGAGACTC  TGTTGTGGTC ACAGTAAGTA CAAAACTCTT AACCATATTG CGGGCTGAAA AATATGTTCC TAATCTTGTC TTCCTTTTTA TGCAGGGAGG CCCTTACTGG AAGGTTCCAA CTGGTAGAAG  AGATGGAAGA ATATCAAACG CCTCGGAAGC CTTGGCAAAC ATCCCTCCTC CGACAAGTAA CTTTTCCAGT CTCCAGACGT CTTTTGCCAG CAAGGGTCTT GACCTAAAAG ACTTGGTACT  ATTGTCTGGT AAGTTTAAAT TAGTACATCC GCGCTCATTT CTGCTTATCC TATGTTAAAA CTTTCCATAC TCTCACAAAA ATCATTGTTA CTATGTACAA TTTTCTATTA GGTGCACATA  CCATTGGAGT CTCTCACTGT CCGTCATTTT CATCACGTTT ATACAATTTT ACTGGAGTTT GGGGTAAAAA AGATCCATCT CTAGACAGCG AATATGCAGC TATTCTTAAG ATGAAGAAAT  GCAAATCCAT CAATGACAAC ACCACAATTG TCGAAATGGA TCCTGGAAGC TCCAGTAAAT TTGATCTTAG CTACTTCCAG CTTGTGCTCA AGAGAAGAGG GCTATTCCAA TCTGATGCAG  CCTTGACAAC AAGTGCGACA ACAAAGTCAT TCATCAACCA GTTAGTACAA GGATCACTGG AACAATTCTA TGCCGAGTTT GGTGTAGCAA TGGAGAAAAT GGGAAAGATT GAGGTCAAGA 
CCGGCTCTGC TGGTGAGATT AGGAAGCACT GTGCAGTTGT GAATAGTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTAAAT TTGGCGATTT GGGTAATCTT CTAGTGTTGT GTATACTACT AGGAATAGTT GGTTCTAGCT ATGGTCAGTT GCAGCTCAAC TTCTATGCAA AGAGCTGTCC GCAAGCAGAA  AAGATAATTC AAGATTATGT GTATAAGCAA ATCCCAAAGG CTCCGTCTCT TGCACCTGCG TTGCTCAGAA TGCATTTCCA CGATTGCTTT GTCAGGGGTT GTGATGGTTC TGTACTCCTG  AATTTCACTT CGAGCACTAA AAACCAGACT GAAAAAGTGG CTGTTCCTAA TCAAACGCTG AGAGGCTTCT CATTTATCGA TGGTGTGAAG AAAGCATTGG AAGCTGAATG CCCTGGAGTT  GTGTCATGTG CGGATATTGT TGCCTTGGTT GCTAGAGACT CTGTTGTGGT CACAGGAGGC CCTTACTGGA AGGTTCCAAC TGGTAGAAGA GATGGAAGAA TATCAAACGC CTCGGAAGCC  TTGGCAAACA TCCCTCCTCC GACAAGTAAC TTTTCCAGTC TCCAGACGTC TTTTGCCAGC AAGGGTCTTG ACCTAAAAGA CTTGGTACTA TTGTCTGGTG CACATACCAT TGGAGTCTCT  CACTGTCCGT CATTTTCATC ACGTTTATAC AATTTTACTG GAGTTTGGGG TAAAAAAGAT CCATCTCTAG ACAGCGAATA TGCAGCTATT CTTAAGATGA AGAAATGCAA ATCCATCAAT  GACAACACCA CAATTGTCGA AATGGATCCT GGAAGCTCCA GTAAATTTGA TCTTAGCTAC TTCCAGCTTG TGCTCAAGAG AAGAGGGCTA TTCCAATCTG ATGCAGCCTT GACAACAAGT  GCGACAACAA AGTCATTCAT CAACCAGTTA GTACAAGGAT CACTGGAACA ATTCTATGCC GAGTTTGGTG TAGCAATGGA GAAAATGGGA AAGATTGAGG TCAAGACCGG CTCTGCTGGT 
GAGATTAGGA AGCACTGTGC AGTTGTGAAT AGTTAA 

Retrieve as FASTA