Entry information : PabeTPO
Entry ID 6592
Creation 2009-02-17 (Christophe Dunand)
Last sequence changes 2011-01-26 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-01-26 (Christophe Dunand)
Peroxidase information: PabeTPO
Name PabeTPO
Class Thyroid peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pongo
Organism Pongo abelii (Sumatran orangutan)    [TaxId: 9601 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabeTPO
start..stop
S start..stop
PpyTPO 1655 0 1..795 1..795
HsTPO01 1569 0 1..795 1..795
GgoTPO 1541 0 1..795 1..793
MmulTPO01 1528 0 1..795 1..795
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 90582..90675 94 N° 2 82898..82982 85 N° 3 74256..74425 170 N° 4 71356..71488 133
N° 5 44644..44773 130 N° 6 42182..42388 207 N° 7 20824..21342 519 N° 8 12940..13198 259
N° 9 9790..9960 171 N° 10 2672..2909 238 N° 11 589..797 209 N° 12 1..191 191
complement(join(1..191,589..797,2672..2909,9790..9960,12940..13198,20824..21342, 42182..42388,44644..44773,71356..71488,74256..74425,82898..82982,90582..90675))


exon

Literature and cross-references PabeTPO
DNA ref. GenBank:   NC_012592.1 (111523636..111432037) [Fragment]
mRNA ref. GenBank:   XM_002812340.1 [Fragment]
Protein sequence: PabeTPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   801 (783)
PWM (Da):   %s   88815.19 (86955.2)  
PI (pH):   %s   6.29 (6.29) Peptide Signal:   %s   cut: 19 range:19-801
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2a, 12 introns). 3'end is missing
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2













Retrieve as FASTA