Entry information : BnPrx06-2_other
Entry ID 6860
Creation 2009-07-10 (Christophe Dunand)
Last sequence changes 2009-07-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-07-10 (Christophe Dunand)
Peroxidase information: BnPrx06-2_other
Name BnPrx06-2_other
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx06-2_other
start..stop
S start..stop
BrPrx06-1Aa_other 362 3e-128 1..184 22..205
BoPrx06_other 362 4e-128 1..184 22..205
AlyPrx06 340 8e-120 1..184 21..204
AhalPrx53 338 6e-119 1..184 21..204
Literature and cross-references BnPrx06-2_other
Literature Malik,M.R., Wang,F., Dirpaul,J.M., Zhou,N., Polowick,P.L., Ferrie ,A.M. and Krochko,J.E. Transcript profiling and identification of molecular markers for early microspore embryogenesis in Brassica napus. Plant Physiol. 144 (1), 134-154 (2007).
DNA ref. GenBank:   CU960958.1 [Fragment]
Protein sequence: BnPrx06-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184
PWM (Da):   %s   19936.12  
PI (pH):   %s   8.13
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DLSSDYYSKT CPDFDQTLVQ VVTDKQIAAP TTAAGTLRLF FHDCMVDGCD ASILVASTSG KTSERDADIN HSLPGDAFDL ITRIKTALEL KCPNIVSCSD ILVGATRSLV KMVGGPRINV 
KYGRKDSLDS YMNRVERKLA RPNMTMDHII SIFRSAGLTV SKKVALVGSH TIGFSHCKEF ASRI 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS (intron 1, no intron 2 and 3)