Entry information : AvePrx114-1C
Entry ID 6874
Creation 2009-07-13 (Ester Simonetti)
Last sequence changes 2012-05-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-09 (Christophe Dunand)
Peroxidase information: AvePrx114-1C
Name AvePrx114-1C
Class Class III peroxidase    [Orthogroup: Prx080]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation N/D
Tissue type Roots
Inducer Cyst nematode infection
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx114-1C
start..stop
S start..stop
AvePrx114-1B 637 0 1..321 1..321
TaPrx114-1A 541 0 3..321 1..319
AvePrx114-1A 541 0 3..321 1..319
HvPrx33 504 0 47..321 1..275
Literature and cross-references AvePrx114-1C
Literature Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009).
DNA ref. GenBank:   EU595581.1
Protein sequence: AvePrx114-1C
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (298)
PWM (Da):   %s   33439.76 (31239.6)  
PI (pH):   %s   8.65 (8.76) Peptide Signal:   %s   cut: 24 range:24-321
Sequence
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Send to Peroxiscan
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MAMAMAPSLS VLLLLCLAAA ASASPQLSPQ FYAKSCPRAL ATIKSAVTAA VRSEPRMGAS LLRLHFHDCF VQGCDASVLL SDTATFTGEQ GAAPNARSIR GMNVIDNIKA QVEAVCRQTV  SCADILAVAA RDSVVALGGP SWTVPLGRRD STTASLSLAN SDLPAPSFDL ANLTANFAAK GLSVTDMVAL SGGHTIGQSQ CRFFRSRLYN ETNIDAAFAA SLKANCPRST GSGNSSLAPL 
DTNTPNGFDN AYYSNLMSQK GLLHSDQVLI NDGRTAGLVR TYSSASAQFN RDFAVAMVRM GNISPLTGAQ GQIRLSCSRV N 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAATGG CAATGGCTCC TTCTCTGTCG GTGCTGTTGC TCCTGTGCCT AGCGGCGGCC GCCTCGGCGT CGCCGCAGCT TTCGCCTCAG TTCTACGCCA AGTCGTGCCC CAGGGCGCTG  GCAACCATCA AGAGCGCCGT GACCGCCGCC GTGAGGAGTG AGCCCCGCAT GGGAGCGTCG CTGCTCCGCC TGCATTTCCA CGACTGCTTT GTCCAAGCAA GTCCCCTTTA CTTACTGTAC  TACTCCCTCC GTCCCTAAAT AAGTCTTTGT AGAGATTTCA CTGTGGACTA CATACGGAGC AAAATGAGTG AATCTACACT CTAAAATGCA TCTACATACA TTCATATGTG GTTCATAGTG  GAATCTCTCC AAAGACTTAT ATTTAGGAAC AGAGGGAGTA GTTTCTACTG CATACAGTTC TGCTACTTAC TCCTAGATTG ACCTAGTTTA AGCTATGGTC AAAGTCATTA CACTATCAAA  AGGTTAATGG AATACTATAG AACACTACTA CTTGTATACC TAACTGCTGA CAAGCTGACG CTCTTAGACA TACTAATAAC TAATCTGACG TTTCAACTCT TCCTTTTGTG ACAGTGACAT  TTCAGTTCAA CTCATCCTTT TTTGACAGTA GAATGTACTG AATTTATCTT GACGGAAGTA TTTTCTTGTG TGTGTGACGA TGCATCAGGG CTGCGACGCG TCCGTACTGC TGAGCGACAC  GGCCACCTTC ACAGGCGAGC AGGGGGCAGC TCCGAACGCC CGCTCCATTC GAGGCATGAA CGTCATTGAC AACATCAAGG CACAGGTCGA GGCCGTGTGC AGGCAGACTG TCTCCTGCGC  CGACATCCTC GCCGTCGCTG CCCGCGACTC CGTCGTCGCC GTAAGATCGA CCAGGCCGTG TACATGCAGT CAATTTGCTG AACGCACGCG ACAGTAAATT AACTGACTTG GTTTTTTACT  AATCGCTTGC AGCTGGGAGG GCCATCGTGG ACCGTTCCTC TGGGGAGGAG GGACTCGACG ACTGCAAGCC TGTCGCTGGC GAACAGCGAC CTGCCTGCAC CATCCTTCGA CCTCGCCAAC  CTCACCGCCA ACTTCGCCGC CAAGGGGCTC AGCGTGACCG ACATGGTCGC CCTCTCTGGC GGCCACACCA TCGGACAATC GCAGTGCCGG TTTTTCAGGA GCAGGCTCTA CAACGAGACC  AACATCGACG CGGCCTTCGC GGCGTCTCTC AAGGCCAACT GCCCCCGGTC CACCGGCTCC GGCAACAGCA GCCTGGCGCC GCTGGACACG AACACGCCCA ACGGGTTCGA CAACGCATAC  TACAGCAACC TGATGTCCCA AAAGGGGCTC CTGCACTCCG ACCAGGTGTT GATCAACGAC GGACGCACCG CCGGCCTGGT CCGGACGTAC TCGTCGGCGT CGGCGCAGTT CAACAGGGAC 
TTCGCAGTTG CCATGGTGAG GATGGGGAAC ATCAGCCCGC TCACCGGGGC GCAGGGGCAG ATCAGGCTCA GCTGCTCCAG GGTGAACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAATGG CAATGGCTCC TTCTCTGTCG GTGCTGTTGC TCCTGTGCCT AGCGGCGGCC GCCTCGGCGT CGCCGCAGCT TTCGCCTCAG TTCTACGCCA AGTCGTGCCC CAGGGCGCTG  GCAACCATCA AGAGCGCCGT GACCGCCGCC GTGAGGAGTG AGCCCCGCAT GGGAGCGTCG CTGCTCCGCC TGCATTTCCA CGACTGCTTT GTCCAAGGCT GCGACGCGTC CGTACTGCTG  AGCGACACGG CCACCTTCAC AGGCGAGCAG GGGGCAGCTC CGAACGCCCG CTCCATTCGA GGCATGAACG TCATTGACAA CATCAAGGCA CAGGTCGAGG CCGTGTGCAG GCAGACTGTC  TCCTGCGCCG ACATCCTCGC CGTCGCTGCC CGCGACTCCG TCGTCGCCCT GGGAGGGCCA TCGTGGACCG TTCCTCTGGG GAGGAGGGAC TCGACGACTG CAAGCCTGTC GCTGGCGAAC  AGCGACCTGC CTGCACCATC CTTCGACCTC GCCAACCTCA CCGCCAACTT CGCCGCCAAG GGGCTCAGCG TGACCGACAT GGTCGCCCTC TCTGGCGGCC ACACCATCGG ACAATCGCAG  TGCCGGTTTT TCAGGAGCAG GCTCTACAAC GAGACCAACA TCGACGCGGC CTTCGCGGCG TCTCTCAAGG CCAACTGCCC CCGGTCCACC GGCTCCGGCA ACAGCAGCCT GGCGCCGCTG  GACACGAACA CGCCCAACGG GTTCGACAAC GCATACTACA GCAACCTGAT GTCCCAAAAG GGGCTCCTGC ACTCCGACCA GGTGTTGATC AACGACGGAC GCACCGCCGG CCTGGTCCGG  ACGTACTCGT CGGCGTCGGC GCAGTTCAAC AGGGACTTCG CAGTTGCCAT GGTGAGGATG GGGAACATCA GCCCGCTCAC CGGGGCGCAG GGGCAGATCA GGCTCAGCTG CTCCAGGGTG 
AACTAA 

Retrieve as FASTA