Entry information : AvePrx110-1B
Entry ID 6880
Creation 2009-07-14 (Ester Simonetti)
Last sequence changes 2012-05-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-09 (Christophe Dunand)
Peroxidase information: AvePrx110-1B
Name AvePrx110-1B
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx110-1B
start..stop
S start..stop
TaPrx62 257 1e-89 1..126 76..201
AvePrx110-1C 255 3e-89 1..126 61..186
AvePrx110-1A 248 1e-86 1..126 44..169
BdiPrx20 233 3e-78 1..125 213..337
Literature and cross-references AvePrx110-1B
Literature Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009).

mRNA ref. GenBank:   EU725471.1 [3' end]
Protein sequence: AvePrx110-1B
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   126
PWM (Da):   %s   13621.75  
PI (pH):   %s   5.89
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RLYNFTGRGG PGDADPSLDA EYAANLRRTK CATPTDNTTI VEMDPGSFLT FDTSYYRGLL KRQGLFQSDA ALITDAAARA DVESVAKGPS EVFFQVFARS MVRMGMIEVK TGGEGEIRRH 
CAIVNS 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. 5' end is missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGCTATACA ACTTCACCGG CCGTGGAGGA CCCGGGGACG CGGACCCATC TCTTGATGCA GAGTATGCTG CCAACCTCCG CCGGACCAAG TGCGCCACGC CCACGGACAA CACCACCATT  GTGGAGATGG ACCCCGGGAG CTTTCTCACC TTTGACACTA GCTACTACCG CGGCCTCCTA AAGCGTCAGG GACTCTTCCA GTCCGACGCC GCGCTTATCA CGGACGCGGC GGCAAGGGCC  GACGTGGAGA GCGTGGCCAA GGGTCCGTCG GAGGTGTTCT TCCAGGTGTT CGCACGGTCC ATGGTGAGGA TGGGCATGAT AGAAGTGAAG ACCGGTGGCG AGGGGGAGAT CAGACGGCAT  TGTGCCATTG TCAATAGCTA GTGTCGTCCG TTGGTGGCAT GTGGACGACT GTTTTTGTAT GTTTAATTAC ATTTCCTTTT TTGCTTTGTG TGTACGGTTT TGTTTATTTT CTTTTTTTGT 
AAGGTGGTTT TTCCAGGTGA TATATGTCTT CTTTCTCTTT TTATGAAAGT AAACAAATAA ATAAGGAACA CGTGTTAGTA AAAAAAAAAA AAAAAAAAAA AAAAAAA 

Retrieve as FASTA