Entry information : AvePrx110-1C
Entry ID 6881
Creation 2009-07-14 (ester Simonetti)
Last sequence changes 2012-05-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-09 (Christophe Dunand)
Peroxidase information: AvePrx110-1C
Name AvePrx110-1C
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx110-1C
start..stop
S start..stop
TaPrx62 376 8e-136 2..186 17..201
AvePrx110-1A 341 2e-122 18..186 1..169
HvPrx78 339 1e-120 2..185 52..235
BdiPrx20 337 3e-118 1..185 153..337
Literature and cross-references AvePrx110-1C
Literature Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009).
mRNA ref. GenBank:   EU725472.1 [3' end]
Protein sequence: AvePrx110-1C
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   186
PWM (Da):   %s   20232.11  
PI (pH):   %s   6.78
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GRRDGRVSIK QEALDQIPAP TMNFTDLLTS FRAKGLDVAD LVWLSGAHTI GISHCNSFTE RLYNFTGRGG PGDADPSLDA EYAANLRRTK CTTPTDNTTI VEMDPGSFLT FDTSYYRGLL 
KRRGLFQSDA ALITDTAARA DVESVAKGPS EVFFQVFARS MVRMGMIEVK TGGEGEIRRH CAVVNS 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. 5' end is missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGGGCGGCG CGACGGCAGG GTGTCGATCA AGCAGGAGGC GCTGGACCAG ATCCCGGCGC CCACCATGAA CTTCACCGAC CTCCTCACCT CCTTCCGCGC CAAGGGCCTC GACGTCGCCG  ACCTCGTCTG GCTCTCAGGG GCACACACCA TCGGCATCTC GCACTGCAAC TCCTTCACCG AGCGGCTATA CAACTTCACC GGCCGCGGAG GACCCGGGGA CGCCGACCCA TCTCTTGATG  CGGAGTATGC TGCCAACCTC CGCCGGACCA AGTGCACCAC ACCCACGGAC AACACCACCA TCGTGGAGAT GGACCCTGGG AGCTTCCTCA CCTTTGACAC TAGCTACTAC CGCGGCCTCC  TCAAGCGCCG GGGACTCTTC CAGTCCGACG CTGCGCTCAT CACCGACACA GCGGCGAGGG CCGACGTCGA GAGCGTGGCC AAGGGTCCCT CAGAGGTGTT CTTCCAGGTG TTCGCACGGT  CCATGGTGAG GATGGGCATG ATAGAAGTGA AGACCGGTGG CGAGGGGGAG ATCAGACGGC ATTGTGCCGT TGTCAACAGC TAGTGGCGTG CGTCCTTGGT GGCACATGGA CGACTGTGTT  TGTATGTTTA GTTGCATTTT ATTTTATTTT TCCTTTTTGT GTATGGTTTT TGTTTATTCT CTCTTTGTAA GGTGGTTTTC TAGTTCTTGT CCAGGTGATA TATGTCTTGT TTCTCTTTTG 
ATGAAAGTAA ACAAATAAAC AAGGAACACG TGTTACTAAA AAAAAAAAAA AAAAAAA 

Retrieve as FASTA