Entry information : BrPrx21-1Ab_other (Bra017206)
Entry ID 6893
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx21-1Ab_other (Bra017206)
Name (synonym) BrPrx21-1Ab_other (Bra017206)
Class Class III peroxidase    [Orthogroup: Prx031]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx21-1Ab_other
start..stop
S start..stop
BnPrx21-2_other 655 0 1..328 1..328
BstrPrx19 634 0 1..328 1..327
AlyPrx21 625 0 8..328 7..327
BrPrx21-1Aa_other 616 0 1..328 1..328
Literature and cross-references BrPrx21-1Ab_other (Bra017206)
Literature Lee,S.C., Lim,M.H., Kim,J.A., Lee,S.I., Kim,J.S., Jin,M., Kwon,S.J., Mun,J.H., Kim,Y.K., Kim,H.U., Hur,Y. and Park,B.S. Transcriptome analysis in Brassica rapa under the abiotic stresses using Brassica 24K oligo microarray. Mol Cells 26 (6), 595-605 (2008).
EST ref. GenBank:   EX092101.1 [5' end]   DN965675.1 [3' end]
Protein sequence: BrPrx21-1Ab_other (Bra017206)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (299)
PWM (Da):   %s   36902.67 (33586.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.45 (7.18) Peptide Signal:   %s   cut: 30 range:30-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIVKMPFCF LAFFCLLLQL FSIFHIGNAE LEMNYYRESC PRAEEIIRQQ VETLYYKHGN TAVSWLRNLF HDCVVKSCDA SLLLETARGV ESEQKSTRSF GMRNFKYIKT IKDALEKECP  GTVSCADIVA LSARDGIVML KGPKIDMIKT GRRDSRGSYL RDVEALVPNH NDSLSSVLSN FNSIGIDVEA TVALLGAHSV GRVHCVNLVH RLYPTIDPTL DPTYALYLKK RCPTPNPNPK 
EVLYSRNDPE TPMVVDNMYY KNIMAHKGLL VIDDEIATDP RTAPFVAKMA ADNGYFHEQF SRAIRLLSET NPLTGDQGEI RKDCRYVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns) and 4 ESTs (EX092101.1, DN965675.1, DN962252.1 compiled with BrPrx21). Cultivar="Chiifu", sub_species="pekinensis".