Entry information : BrPrx22-1Ab_other (Bra000058)
Entry ID 6894
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx22-1Ab_other (Bra000058)
Name (synonym) BrPrx22-1Ab_other (Bra000058)
Class Class III peroxidase    [Orthogroup: Prx040]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx22-1Ab_other
start..stop
S start..stop
BoPrx22-1Cb_other 675 0 1..350 1..350
BrPrx22-1Aa_other 624 0 1..350 1..350
AhalPrx38 608 0 1..350 1..349
TsPrx23 606 0 1..350 1..350
Literature and cross-references BrPrx22-1Ab_other (Bra000058)
Literature Lee,S.C., Lim,M.H., Kim,J.A., Lee,S.I., Kim,J.S., Jin,M., Kwon,S.J., Mun,J.H., Kim,Y.K., Kim,H.U., Hur,Y. and Park,B.S. Transcriptome analysis in Brassica rapa under the abiotic stresses using Brassica 24K oligo microarray. Mol Cells 26 (6), 595-605 (2008).
EST ref. GenBank:   EX136445.1 [5' end]   EX034675.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.17859
Protein sequence: BrPrx22-1Ab_other (Bra000058)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   350 (321)
PWM (Da):   %s   37760.83 (34791.3)  
PI (pH):   %s   5.11 (4.81) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKFSPSFSCS AMGALILGCL LLRASISNAQ LRPDFYFGTC PHVFDIIGNV IVDELASDPR IAASILRLHF HDCFVNGCDA SILLDNSTSF RTEKDAAPNA NSARGFNVID RMKAKLETAC  PKTVSCADVL TIASQISVLL SGGPWWPLPL GRRDSLQAFF DLANTALPSP FFTLAELKAS FVAVGLNLSS DLVALSGGHT FGRAQCQFVT PRLYNFNGTN SPDPSINPTY LAQLRGLCPQ 
NGNGTVLVNF DPVTPDGFDN KYYTNLRNGR GLIQSDQELF STPQADTIPL VEQYSSNQTA FFDAFAKAMI RMGDLKPLTG NQGEIRLNCS VVNSRIMSVE NEDDGVVSSI 

Retrieve as FASTA  
Remarks Complete sequence from 13 ESTs. Cultivar="Chiifu", sub_species="pekinensis".