Entry information : BnPrx20_other
Entry ID 6897
Creation 2009-08-04 (Christophe Dunand)
Last sequence changes 2009-08-04 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-08-14 (Christophe Dunand)
Peroxidase information: BnPrx20_other
Name BnPrx20_other
Class Class III peroxidase     [Orthogroup: Prx041]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Germinating seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx20_other
start..stop
S start..stop
BrPrx20-1Aa_other 544 0 1..263 2..264
TsPrx20 511 0 3..263 7..267
CrubPrx116 500 0 1..263 6..268
AhalPrx14 498 1e-180 1..263 5..267
Literature and cross-references BnPrx20_other
EST ref. GenBank:   ES902908.1 [Fragment]
Protein sequence: BnPrx20_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   263 (243)
PWM (Da):   %s   29325 (27211.8) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.77 (6.77) Peptide Signal:   %s   cut: 21 range:21-263
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
EMKLWVSLIV VSAITTTALG DFGGALVKGF YKESCPLAEE IVKHNVEVAV LKDPRMAASL LRLQFHDCFV LGCDASVLLD THGDILSEKQ ATPNVNSLRG FEVIDYIKYL LEEACPLTVS  CSDIITMAAR DSVFLRGGPW WEVYLGRRDS LKASFAGANQ YIPAPNTSLE GLIINFKQQG LAIQDLIALS GAHTIGKARC VSFKQRINQP NMLQTFYVDE FKRHSTFRRI LRSQCKDSSR 
DNELSPLDIQ TPAYFDNHYY INL 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST (? contains 80 extra nt => intron 2)