Entry information : BrPrx41-1Ab_other (Bra012649)
Entry ID 6912
Creation 2009-08-06 (Christophe Dunand)
Last sequence changes 2009-08-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx41-1Ab_other (Bra012649)
Name (synonym) BrPrx41-1Ab_other (Bra012649)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Pollens
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx41-1Ab_other
start..stop
S start..stop
BoPrx41-1Cb_other 662 0 1..329 1..329
TsPrx41 567 0 18..329 20..333
AlyPrx41 562 0 4..329 2..326
CagraPrx70 560 0 4..329 2..326
Literature and cross-references BrPrx41-1Ab_other (Bra012649)
DNA ref. GenBank:   EX064626.1 [3' end]   AC232561.1 (41209..40220)
Protein sequence: BrPrx41-1Ab_other (Bra012649)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   945 (307)
PWM (Da):   %s   107279.59 (33856.9) Transmb domain:   %s   i5-27o
PI (pH):   %s   9.86 (7.03) Peptide Signal:   %s   cut: 23 range:23-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLTSWFLNVF FLVLAFVPLI LSAPATSLTK DYYQKTCPDF SKIVRETVTT KQAQQPTTAA GTLRVFFHDC FLEGCDASVL VATNSFNKAE RDDELNESLP GDAFDIVTRI KTALELSCPG  VVSCADILAQ STRDLITIVG GPFYEVKLGR KDGFESKAHK VHGNIPIANH TVHDMMSIFK KNGFSLKEMV ALSGGHTVGF AHCIEFSSRL FGPRADPELD SRYADRLKDL CKDHTVNKSM 
AAFLDPITPG KFDNMYFKNL KRGLGLLASD HALFKDNGTR PFVDLYADNQ TAFFDDFARA MEKLGMVGVK GDNDGEVRRK CDHFNKLDV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 2 ESTs (EX064856.1). Incorrect prediction from Phytozome (only last part corresponding with the last exon).