Entry information : BrPrx64_other (Bra001986)
Entry ID 6917
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx64_other (Bra001986)
Name (synonym) BrPrx64_other (Bra001986)
Class Class III peroxidase    [Orthogroup: Prx015]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Inflorescences
Siliques
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx64_other
start..stop
S start..stop
BoPrx64-1Ca_other 615 0 22..317 1..296
TsPrx64-1 608 0 1..317 1..317
BstrPrx12 607 0 1..317 1..317
CrubPrx43 600 0 1..317 1..317
Literature and cross-references BrPrx64_other (Bra001986)
Literature Lee,S.C., Lim,M.H., Kim,J.A., Lee,S.I., Kim,J.S., Jin,M., Kwon,S.J. , Mun,J.H., Kim,Y.K., Kim,H.U., Hur,Y. and Park,B.S. Transcriptome analysis in Brassica rapa under the abiotic stresses using Brassica 24K oligo microarray. Mol Cells 26 (6), 595-605 (2008).
EST ref. GenBank:   EX084904.1 [5' end]   EX085137.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.24498
Protein sequence: BrPrx64_other (Bra001986)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (295)
PWM (Da):   %s   34454.38 (31973.0)  
PI (pH):   %s   9.21 (9.40) Peptide Signal:   %s   cut: 23 range:23-317
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNVYFLSLIL TVILVISFNT EALSPHYYDH SCPQADQIVT NAVKKAMSND KTVPAALLRM HFHDCFVRGC DASVLLDSKG KNKAEKDGPP NISLHAFYVI DNAKKALEEQ CPGVVSCADI  VSLAARDAVA LSGGPTWEVP KGRKDGRVSK AIETRQLPAP TFNISQLQQS FSQRGLSMHD LVVLSGGHTL GFAHCSSFQN RINNFSTQKQ VDPTLNPSFA ASLKGICPAH NKAKNAGATM 
DGSTTSFDNI YYKMLMQGKS LFSSDQALLT TPSTKKLVAK YATSMEEYER AFVKSMIKMS SISGNGNEVR LNCRRVR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 14 ESTs.