Entry information : BrPrx59-1Aa_other (Bra002271)
Entry ID 6918
Creation 2009-08-12 (Christophe Dunand)
Last sequence changes 2012-07-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx59-1Aa_other (Bra002271)
Name (synonym) BrPrx59-1Aa_other (Bra002271)
Class Class III peroxidase    [Orthogroup: Prx023]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx59-1Aa_other
start..stop
S start..stop
BnPrx59_other 672 0 2..328 1..327
TsPrx59 587 0 2..328 1..331
BstrPrx86 586 0 2..328 1..328
AruPrx06 577 0 2..327 1..327
Literature and cross-references BrPrx59-1Aa_other (Bra002271)
Literature Lee,S.C., Lim,M.H., Kim,J.A., Lee,S.I., Kim,J.S., Jin,M., Kwon,S.J., Mun,J.H., Kim,Y.K., Kim,H.U., Hur,Y. and Park,B.S. Transcriptome analysis in Brassica rapa under the abiotic stresses using Brassica 24K oligo microarray. Mol Cells 26 (6), 595-605 (2008)
DNA ref. GenBank:   AC189430.2 (44419..42722)
EST ref. GenBank:   EX101344.1 [3' end]
Protein sequence: BrPrx59-1Aa_other (Bra002271)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (303)
PWM (Da):   %s   35293.79 (32509.4)  
PI (pH):   %s   8.03 (7.22) Peptide Signal:   %s   cut: 26 range:26-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMKTQNKNVL LTIFTLCMIC SGARSQLSPA IYDKSCPYLV QIVRKQVNMA LKAEIRMAAS LIRLHFHDCF VNGCDASVLL DGADSEKLSI SNANSARGFE VVDTIKAAVE SACPGVVSCA  DILTLAARES VYMTGGPMWR VALGRKDGLV ANQSSANNLP SPFEPLDAII AKFQAVGLNV TDVVALSGAH TFGQAKCDLF RNRLFNFTGQ GSPDATLETT LLSDLRTVCP IGGNGNVTAP 
LDRNSTDVFD NNYFKNLLQG KGLLSSDQIL FSSDLAVNTT KRLVEAYSQS QSLFFRDFTC SMIRMGGIMN PINGSSGEVR KNCRVINN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 1 EST. Incorrect predcition from Phytozome: large PS is missing.