Entry information : BrPrx53-1Aa_other (Bra009220 )
Entry ID 6921
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2012-07-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx53-1Aa_other (Bra009220 )
Name (synonym) BrPrx53-1Aa_other (Bra009220 )
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx53-1Aa_other
start..stop
S start..stop
TsPrx53 629 0 1..338 1..339
AruPrx53-1 612 0 1..338 1..336
AruPrx53-2 611 0 1..338 1..336
AtPrx53 607 0 1..338 1..335
Literature and cross-references BrPrx53-1Aa_other (Bra009220 )
EST ref. GenBank:   EX028964.1 [5' end]
Cluster/Prediction ref. UniGene:   Bra.16071
Protein sequence: BrPrx53-1Aa_other (Bra009220 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339
PWM (Da):   %s   35190.29 Transmb domain:   %s   i12-31o
PI (pH):   %s   4.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVTNTPTTC DGFFIVILTT LIISSSLFGT SNAQLNATFY SGTCPNASAI VRTTIQQALQ SDSRIGASLI RLHFHDCFVN GCDASILLDD SGSIQSEKNA GPNANSARGF NVVDNIKTAL  ENACPGVVSC SDVLALASEA SVSLSGGPSW TVLLGRRDSL TANQAGANSS IPSPVESLTN ITSKFSAVGL NTNDLVALSG AHTFGRARCG VFSNRLFNFS GSGNPDPTLN TTLLSSLQQI 
CPQNGTGSGI TNLDLSTPDA FDNNYFTNLQ SNNGLLQSDQ ELFSTTGSAT IAIVTSFASN QSLFFQAFAQ SMINMGNITP LTGNSGEIRL DCKKVNGS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 5 ESTs. Short 3' end is missing.