Entry information : BrPrx52-1Ab_other (Bra009105)
Entry ID 6926
Creation 2009-08-11 (Christophe Dunand)
Last sequence changes 2012-07-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx52-1Ab_other (Bra009105)
Name (synonym) BrPrx52-1Ab_other (Bra009105)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx52-1Ab_other
start..stop
S start..stop
BnPrx52-2_other 652 0 1..325 1..325
BoPrx52-1Cb_other 650 0 1..325 1..325
BstrPrx47 591 0 1..325 1..324
TsPrx52 584 0 1..325 1..324
Literature and cross-references BrPrx52-1Ab_other (Bra009105)
Literature Kleinschmidt,A.M. Class III Peroxidases of Brassica rapa.
mRNA ref. GenBank:   GQ258782.1 [3' end]
EST ref. GenBank:   EX032611.1 [Fragment]
Cluster/Prediction ref. UniGene:   Bra.10274
Protein sequence: BrPrx52-1Ab_other (Bra009105)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (305)
PWM (Da):   %s   34114.92 (32002.7)  
PI (pH):   %s   7.98 (7.98) Peptide Signal:   %s   cut: 21 range:21-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNNLFIAI LAIVVTLSLQ GDNNNVVQAQ LTTNFYSTSC PNLLSTVRST VKSAVDSQPR TGASILRLFF HDCFVNGCDG SILLDDTSSF TGEQNANPNR NSARGFNVID NIKTAVEAAC  PGVVSCADIL AIAARDSVVL LGGPNWNVKV GRRDARTASQ AAANNNIPAP TSSLSQLISS FSAVGLSTRD MVALSGAHTI GQSRCTNFRT RVYNETNINA AFATLRQRSC PRAAGSGDGN 
LAPLDVNSAN TFDNSYFKNL VAQRGLLHSD QELFNGGSTD SIVTGYSNNP SSFSSDFTAA MIKMGDISPL TGSSGEIRKV CGRTN 

Retrieve as FASTA  
Remarks Partial sequence from genomic (3 introns), 3 ESTs and 1 mRNA. Cultivar="Fast Plant". Incorrect prediction from Phytozome: 50 last AA are missing due to stop codon in frame.