Entry information : SmPrx70-2_63 (SmPrx70b_63)
Entry ID 7047
Creation 2009-10-18 (Paula Nunes)
Last sequence changes 2009-10-18 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx70-2_63 (SmPrx70b_63)
Name (synonym) SmPrx70-2_63 (SmPrx70b_63)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx70-2_63
start..stop
S start..stop
SmPrx70-1_38 667 0 1..326 1..326
SmPrx10-2_25 369 1e-128 4..326 1..323
SmPrx10-1_3 368 2e-128 4..326 1..323
SmPrx35-1_84 356 1e-123 7..326 11..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 838670..838876 207 N° 2 838935..839123 189 N° 3 839203..839368 166 N° 4 839432..839850 419
join(838670..838876,838935..839123,839203..839368,839432..839850)


exon

Literature and cross-references SmPrx70-2_63 (SmPrx70b_63)
DNA ref. Phytozome 12:   scaffold_63 (838670..839850)
mRNA ref. JGI transcript:   181167
EST ref. GenBank:   FE498921.1 [3' end]
Protein sequence: SmPrx70-2_63 (SmPrx70b_63)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   35461.84 (33000.6)  
PI (pH):   %s   6.87 (6.51) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKSMSFCFVVVVFLALAEISRCELRLGFYADSCPEAESVVQFTVAQAVATNPGIAAGLLRLHFHDCFVRGCDGSVLVDSTGNNKAEKDAIPNFGLRGFEVIDNAKARLEDRCPGTVSCADILTYAARDAVSQVGGPRWDVLGGRRDGTVSRADQVGANLPSPLFNVDQLTKSFVRKGMTQEEMITLSGAHTIGIAHCLSFVNRLYNFSTTSVQDPDLDPNMAKLLKSLCPKGSDFLDPKSKSIALDPLSPNFFDNGYYTSLSLRRSILTSDQILFADLDTRDSVEDKQANEAVWRFKFVNAMVKMSTIGVLSGNQGRIRTNCRVVS

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTCCATGAGCTTTTGCTTCGTCGTCGTCGTGTTTCTTGCGCTCGCGGAGATCTCACGCTGCGAGCTGAGGCTGGGTTTTTATGCCGACTCGTGCCCCGAGGCCGAGTCCGTCGTC
CAGTTCACGGTGGCTCAGGCAGTCGCGACTAATCCTGGAATCGCTGCTGGGCTTCTACGTCTTCACTTCCACGATTGCTTTGTCCGG
GTAAGCTTTGCTTTTGATTCTTTTGTCGAGCTT
CTCTCATGATCTCCATCTTTGGCAGGGATGCGATGGCTCGGTTCTCGTCGATTCTACCGGGAACAACAAGGCCGAGAAGGATGCGATTCCAAACTTCGGTCTTCGTGGGTTCGAAGTCAT
TGACAATGCAAAGGCTCGGCTCGAGGATCGGTGTCCTGGAACAGTGTCTTGTGCTGATATACTCACGTACGCTGCTCGCGACGCCGTCTCACAG
GTATAGAATGAAAAAAGAAGTGATTT
TTTGTTGTAGTTTTCTTCAGGAGCTTGCGTAAACTGGTGGTTTTGAAACACAGGTTGGAGGACCTCGCTGGGACGTCCTCGGTGGAAGAAGAGATGGAACCGTGTCTCGAGCAGACCAAG
TCGGCGCAAATCTTCCATCGCCGCTGTTCAACGTCGATCAACTGACCAAGAGTTTTGTTCGCAAAGGAATGACACAGGAAGAAATGATCACTCTCTCAG
GTGAAAATTTCCATCATGCTC
ATCTCTCAATCGCCAAAAAGTTTGTTTTTTATTCCATCGTAGGAGCTCACACGATTGGAATCGCGCATTGCCTCTCCTTCGTCAACAGGTTGTATAACTTCAGCACCACCTCGGTCCAGG
ATCCCGACTTGGATCCAAACATGGCCAAACTTCTCAAATCTCTGTGTCCCAAAGGCAGCGACTTCCTGGATCCTAAAAGCAAATCCATAGCTCTCGACCCTCTCTCTCCCAACTTCTTCG
ACAATGGCTACTACACATCGCTCAGCCTTCGCAGGAGCATACTCACGTCGGACCAGATCTTGTTCGCGGACTTGGACACTCGAGACAGTGTCGAGGACAAGCAGGCCAACGAGGCCGTTT
GGAGGTTTAAGTTCGTGAATGCAATGGTAAAGATGAGCACCATCGGTGTGCTCTCTGGTAACCAGGGGCGAATCCGCACGAACTGTAGAGTAGTTTCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTCCATGAGCTTTTGCTTCGTCGTCGTCGTGTTTCTTGCGCTCGCGGAGATCTCACGCTGCGAGCTGAGGCTGGGTTTTTATGCCGACTCGTGCCCCGAGGCCGAGTCCGTCGTC
CAGTTCACGGTGGCTCAGGCAGTCGCGACTAATCCTGGAATCGCTGCTGGGCTTCTACGTCTTCACTTCCACGATTGCTTTGTCCGG
GGATGCGATGGCTCGGTTCTCGTCGATTCTACC
GGGAACAACAAGGCCGAGAAGGATGCGATTCCAAACTTCGGTCTTCGTGGGTTCGAAGTCATTGACAATGCAAAGGCTCGGCTCGAGGATCGGTGTCCTGGAACAGTGTCTTGTGCTGAT
ATACTCACGTACGCTGCTCGCGACGCCGTCTCACAG
GTTGGAGGACCTCGCTGGGACGTCCTCGGTGGAAGAAGAGATGGAACCGTGTCTCGAGCAGACCAAGTCGGCGCAAATCTTCCA
TCGCCGCTGTTCAACGTCGATCAACTGACCAAGAGTTTTGTTCGCAAAGGAATGACACAGGAAGAAATGATCACTCTCTCAG
GAGCTCACACGATTGGAATCGCGCATTGCCTCTCCTTC
GTCAACAGGTTGTATAACTTCAGCACCACCTCGGTCCAGGATCCCGACTTGGATCCAAACATGGCCAAACTTCTCAAATCTCTGTGTCCCAAAGGCAGCGACTTCCTGGATCCTAAAAGC
AAATCCATAGCTCTCGACCCTCTCTCTCCCAACTTCTTCGACAATGGCTACTACACATCGCTCAGCCTTCGCAGGAGCATACTCACGTCGGACCAGATCTTGTTCGCGGACTTGGACACT
CGAGACAGTGTCGAGGACAAGCAGGCCAACGAGGCCGTTTGGAGGTTTAAGTTCGTGAATGCAATGGTAAAGATGAGCACCATCGGTGTGCTCTCTGGTAACCAGGGGCGAATCCGCACG
AACTGTAGAGTAGTTTCTTGA

Retrieve as FASTA