Entry information : NtPrx01-1A (NtPrx01a)
Entry ID 712
Creation 2008-01-03 (Christophe Dunand)
Last sequence changes 2011-04-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-20 (Christophe Dunand)
Peroxidase information: NtPrx01-1A (NtPrx01a)
Name (synonym) NtPrx01-1A (NtPrx01a)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx01-1A
start..stop
S start..stop
NtPrx01-1B 612 0 1..306 1..306
CanPrx02_hanbyul 608 0 2..324 1..322
LePrx26 597 0 2..324 1..319
NsPrx01 573 0 6..324 5..322
Literature and cross-references NtPrx01-1A (NtPrx01a)
Literature Matsuoka,K. et al., A Comprehensive Gene Expression Analysis Toward the Understanding of Growth and Differentiation of Tobacco BY-2 Cells
Plant Cell Physiol. 45, 1280-1289 (2004).
EST ref. GenBank:   BP128865.1 [5' end]   AM843588.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.13587
Protein sequence: NtPrx01-1A (NtPrx01a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (295)
PWM (Da):   %s   34763.39 (31656.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.32 (7.29) Peptide Signal:   %s   cut: 30 range:30-324
Sequence
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Send to Peroxiscan
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MISISSNSFA AIAAMFSLLF IFSSMQCHAQ LSSTFYDRTC PNALNTIRTS VRQAVSRERR MAASLIRLHF HDCFVQGCDA SILLDETPTI VSEKTALPNL GSARGYGIIE DAKRELEKTC  PGIVSCADIL AVAARDASTL VGGPTWAVKL GRRDSTTASH TLAETDLPGP FDPLNRLISC FASKGLSTRD MVALSGAHSI GQAQCFLFRD RIYGNGTDID AGFASTRRRQ CPKEDQNGNL 
APLDLVTPNQ LDNNYFKNLG QRKGLLQSDQ VLLSGGSTDD IVSEYSNSPR AFASDFAAAM IRMGDISPLT GQNGIIRTVC GSLN 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs. Cultivar="Bright Yellow No.2" and "SNN".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGCTGCTATG TTTTCTCTTC TCTTTATAAT CTCCAGCATG CAATGCCATG CACAACTTTC TTCCACATTC TATGATCGCA CTTGCCCTAA TGCTCTCAAC ACCATTCGTA CAAGTGTTAG  ACAAGCAGTG TCACGTGAAC GTCGAATGGC TGCATCTCTT ATTCGCCTTC ATTTTCATGA TTGCTTTGTT CAGGTTGGTT ATACACACAT CAATTAGTAT GTTTCTCTAT TTACTTCAAG  TTAAAATTAT TAACATGATT ACATATTTAC TCACTTGTGG TTTTAACTAT AGGGTTGTGA TGCTTCTATC TTACTTGACG AAACCCCTAC AATTGTTAGT GAGAAGACTG CGTTGCCGAA  TCTTGGGTCA GCTAGAGGCT ATGGTATTAT AGAAGATGCC AAAAGAGAGC TTGAAAAAAC ATGTCCAGGA ATTGTATCAT GTGCAGACAT ACTTGCTGTT GCCGCTAGAG ATGCATCAAC  TCTCGTAAGT ATCCGTACTT TGATTTTCAT TTTCTTCACA TTATAATCAA ACCTCTCTAA CATGCATGTT TGTTCTGATA TTTTTTGGAA AACTTGGGTT TTGTAGTGAA TGGTTGTTAA  ATGCGGATGT TGTTTAAAGA AGTCTCACTA TATATCAAAC TAACTAACAT TATGTTAATA AATTACAATT AGGTTGGAGG TCCAACATGG GCAGTGAAAC TCGGAAGAAG AGATTCAACA  ACTGCAAGTC ATACACTTGC TGAAACTGAT CTCCCAGGTC CATTTGATCC TCTTAATAGG CTTATTTCTT GCTTTGCAAG CAAAGGCCTT AGCACAAGGG ATATGGTTGC TTTATCAGGT 
AAAAACTA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACAGAGCTA ATTTATAAGT TTTCTATTCT TAGTTCTTGA CATCATATCA CCAATACATT GCAATATTTT CGAAATGATT AGTATTTCAA GCAACTCTTT TGCAGCCATT GCTGCTATGT  TTTCTCTTCT CTTTATATTC TCCAGCATGC AATGCCATGC ACAACTTTCT TCCACATTCT ATGATCGCAC TTGCCCTAAT GCTCTCAACA CCATTCGTAC AAGTGTTAGA CAAGCAGTGT  CACGTGAACG TCGAATGGCT GCATCTCTTA TTCGCCTTCA TTTTCATGAT TGCTTTGTTC AGGGTTGTGA TGCTTCTATC TTACTTGACG AAACCCCTAC AATTGTTAGT GAGAAGACTG  CGTTGCCGAA TCTTGGGTCA GCTAGAGGCT ATGGTATTAT AGAAGATGCC AAAAGAGAGC TTGAAAAAAC ATGTCCAGGA ATTGTATCAT GTGCAGACAT ACTTGCTGTT GCCGCTAGAG  ATGCATCAAC TCTCGTTGGA GGTCCAACAT GGGCAGTGAA ACTCGGAAGA AGAGATTCAA CAACTGCAAG TCGTACACTT GCTGAAACTG ATCTCCCAGG TCCATTTGAT CCTCTTAATA  GGCTTATTTC TTGCTTTGCA AGCAAAGGCC TTAGCACAAG GGATATGGTT GCTTTATCAG GAGCACATTC AATTGGCCAA GCACAATGTT TCCTTTTTCG CGATAGGATT TATGGAAATG  GAACAGATAT TGATGCTGGA TTTGCTAGCA CAAGAAGACG TCAATGTCCT AAAGAAGACC AAAATGGAAA CCTAGCTCCA CTTGATTTGG TCACACCTAA TCAATTGGAT AACAATTATT  TCAAGAACTT GGGGCAAAGA AAAGGTCTTC TTCAATCAGA TCAAGTCCTT CTTAGTGGTG GATCTACTGA TGATATTGTT TCTGAATATA GTAACAGTCC TCGCGCATTT GCCTCTGATT  TTGCTGCTGC TATGATTAGA ATGGGAGATA TTAGTCCCCT AACTGGTCAA AATGGGATCA TAAGAACTGT CTGCGGCTCC CTAAATTGAT CATTCAAAAG CTTATTACAT GTATTTTGTA 
TTTATTTGAT TCTTTAATTC TCTATGTAAT GTTTCAAGAA TGA 

Retrieve as FASTA