Entry information : PedPrx04
Entry ID 7162
Creation 2010-01-22 (Cyril Jourda)
Last sequence changes 2010-01-22 (Cyril Jourda)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-02-16 (Christophe Dunand)
Peroxidase information: PedPrx04
Name PedPrx04
Class Class III peroxidase    [Orthogroup: Prx014]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Phyllostachys
Organism Phyllostachys edulis    [TaxId: 38705 ]
Cellular localisation N/D
Tissue type Embryos
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PedPrx04
start..stop
S start..stop
OsPrx33 536 0 13..326 1..311
SiPrx154 533 0 10..326 18..331
TaPrx55-A 508 0 22..324 33..329
TaPrx55 506 0 22..324 33..329
Literature and cross-references PedPrx04
Literature REFERENCE 1. Jiang,Z.H., Li,J.Y., Peng,Z.H., Li,L.B., Hu,T., Liu,X.H., Lu,T.T.,Yu,S.L., Li,Y., Feng,Q., Fan,D.L., Wen,Q.J., Mu,J., Guan,J.P. and Han,B. Unpublished
mRNA ref. GenBank:   FP101172
Protein sequence: PedPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (305)
PWM (Da):   %s   33582.55 (31397.4)  
PI (pH):   %s   5 (4.82) Peptide Signal:   %s   cut: 22 range:22-326
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRLGAVLVSV VLMAMAAWSQ AQLQVGFYDT MCPAAEIIVQ EEVSKAVSNS PGTAAGLLRL HFHDCFVRGC DASVLLGSTP NNQAEKDASP NTSLRGFEVI DSAKTRLEQA CFGVVSCADI  LAFAARDALA LVGGNAYQVP AGRRDGNVSV AQETNGNLPP PTANVNQLTQ IFGSKGLTKA EMVALSGAHT IGVAHCSSFS NRLYSYGPNA GPDPSMDPSY LATLTQQCPQ QQGSGGGGGG 
QLVALDPVTP TAFDTNYFAG IVANRGLLTS DQALLSDQAT AAQIVGYTNS PDTFQTDFAA AMVKMGATSV LTGTSGTIRT NCRVAS 

Retrieve as FASTA  
Remarks Complete sequence from mRNA. No EST.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATCCTTAACC AAGAAGCATA GCGCCACCGA AAAGTTGGCC TCTTGCTGCT GCAGCCTTGA GGATTAGCGC TTAAGCAAGA ACTGAACTGT CCAGGGAGCT AGCTAGGCAG GTAGGCTAGT  GGGAGATGGA GGCGCGAGGC GGCAGAGGAG GAGCGCGAAT GTAGATGCGG CTGGGGGCTG TGCTCGTGTC CGTGGTGCTG ATGGCGATGG CGGCGTGGTC GCAGGCGCAG CTGCAGGTGG  GGTTCTACGA CACGATGTGC CCGGCGGCGG AGATCATCGT GCAGGAAGAG GTCAGCAAGG CGGTGTCGAA TAGCCCGGGC ACGGCTGCCG GCCTCCTCCG GCTGCACTTC CACGACTGCT  TCGTCAGGGG CTGCGACGCG TCCGTCCTGC TGGGCTCGAC GCCGAACAAC CAGGCGGAGA AGGACGCGTC CCCGAACACG AGCCTTCGCG GCTTCGAGGT CATCGACAGC GCCAAGACGA  GGCTGGAGCA GGCCTGCTTC GGCGTCGTCT CCTGCGCGGA CATACTGGCG TTCGCGGCCA GAGACGCCCT CGCATTGGTC GGAGGCAACG CGTACCAGGT GCCGGCCGGG CGAAGAGACG  GTAACGTCTC GGTCGCGCAG GAGACCAACG GGAACCTGCC ACCCCCGACC GCGAACGTGA ACCAGCTCAC GCAAATCTTC GGTTCCAAGG GCCTCACCAA GGCCGAAATG GTCGCCCTCT  CAGGGGCGCA CACGATTGGG GTGGCGCACT GCAGCTCATT CAGCAACCGG CTCTACTCGT ACGGGCCGAA CGCGGGGCCG GACCCGAGCA TGGACCCGAG CTACCTGGCG ACGCTGACGC  AGCAGTGCCC GCAGCAGCAG GGGAGCGGCG GCGGCGGCGG CGGCCAGCTG GTGGCCTTGG ACCCCGTGAC CCCCACCGCC TTTGACACCA ACTACTTCGC CGGCATCGTC GCCAACCGCG  GCCTGCTCAC CTCCGACCAG GCGCTCCTTA GCGACCAGGC CACCGCCGCG CAGATCGTCG GCTACACCAA CAGCCCCGAC ACGTTCCAGA CCGACTTCGC CGCCGCCATG GTCAAGATGG  GCGCCACCAG CGTGCTCACC GGCACCAGCG GCACCATCAG GACCAACTGC AGGGTGGCCA GCTGAGCTGA CACATCCATC GGTGACTAAT GCTCGATGCA CGCATGCTTG ATGAGTTGGG  CTGTGATTAA AATGTACGTA GGACCATGGA CGGACTCTCA AGAGTTCACA GGTGTTCAGC CGAATATCTA TTTTTTTCTT TAAAATATCT TGTATATAAT AGGTATACTA GGTGTTATTA 
GTTAGGTCAA AACTTTGTAT TTGTGTCCAC AAATAAATTA AATTTGTATT CTCCAT 

Retrieve as FASTA