Entry information : PabPrx19 (PaSEP)
Entry ID 7170
Creation 2010-01-26 (Cyril Jourda)
Last sequence changes 2010-01-26 (Cyril Jourda)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-01-28 (Christophe Dunand)
Peroxidase information: PabPrx19 (PaSEP)
Name (synonym) PabPrx19 (PaSEP)
Class Class III peroxidase     [Orthogroup: Prx023]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx19
start..stop
S start..stop
PtaPrx20 241 8e-82 2..130 71..199
PabPrx84 240 3e-81 2..130 71..199
PabPrx137 207 3e-68 2..130 71..199
PtaPrx33 195 1e-64 2..130 65..193
Literature and cross-references PabPrx19 (PaSEP)
Literature REFERENCE 1. Asante D.K., Yakovlev I.A., Fossdal C.G., Timmerhaus G., Partanen J., Johnsen O. Effect of bud burst forcing on transcript expression of selected genes in needles of Norway spruce during autumn. Plant Physiol. Biochem. 47:681-689(2009).

REFERENCE 2. akovlev I.A., Asante D.K.A., Fossdal C.G., Johnsen O., Partanen J., Junttila O. Analysis of gene expression during experimental initiation of bud burst in Norway spruce. Unpublished.
Protein ref. GenPept:   ACA04887 [Fragment] UniProtKB:   B2KZJ6 [Fragment]
mRNA ref. GenBank:   EU332985 [Fragment]
Protein sequence: PabPrx19 (PaSEP)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   130
PWM (Da):   %s   13060.61  
PI (pH):   %s   4.71
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGCDASNLLD DNATFTGEKT AGPNNNSLRG FEVIDAAKAA LENSCSQTVx CADIVAIAAR DSVFLNGGxF WKVLLGRRDS TTANQTAANV GIPAPFDSVT TIIKKFTDVG LAATDVVPLS 
GGHTIGRARC 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (ES228373.1, ES228392.1).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACGCGGGCTG CGATGCGTCA AATCTYCTGG ATGATAATGC TACGTTCACG GGAGAAAAGA CAGCCGGCCC YAATAACAAT TCATTACGAG GATTCGAGGT GATAGACGCG GCTAAGGCAG  CTTTGGAAAA CTCATGCAGC CAGACCGTGY CCTGCGCAGA TATTGTGGCT ATCGCAGCCC GCGACTCTGT GTTTCTGAAC GGAGGTCYAT TCTGGAAAGT TCTCTTAGGT CGAAGGGATA  GCACAACTGC CAACCAGACT GCGGCGAACG TGGGCATTCC AGCACCCTTT GACTCCGTAA CGACAATTAT CAAGAAATTT ACAGATGTCG GCCTCGCCGC CACGGATGTT GTGCCYCTCT 
CAGGAGGTCA CACAATTGGG CGCGCCCGAT GT 

Retrieve as FASTA