Entry information : NtPrx20-1A (NtPrx20a)
Entry ID 7210
Creation 2010-02-12 (Christophe Dunand)
Last sequence changes 2010-02-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-02-12 (Christophe Dunand)
Peroxidase information: NtPrx20-1A (NtPrx20a)
Name (synonym) NtPrx20-1A (NtPrx20a)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx20-1A
start..stop
S start..stop
NtPrx20-1B 657 0 1..329 1..329
LePrx01 604 0 1..329 1..328
LePrx15 560 0 1..328 1..328
LePrx105 557 0 1..328 1..328
Literature and cross-references NtPrx20-1A (NtPrx20a)
EST ref. GenBank:   EB424888.1 [5' end]   FG179543.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.11965   Nta.6045
Protein sequence: NtPrx20-1A (NtPrx20a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (306)
PWM (Da):   %s   35903.27 (33537.1)  
PI (pH):   %s   8.63 (8.73) Peptide Signal:   %s   cut: 24 range:24-329
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASFGYLSIL VLCILGFVSS GHAQLQLNFY AKSCPNAEKI IKDFVQKQVP KAPNTAAAIL RMHFHDCFVR GCDGSVLLNF TSSTGNQTEK QANPNLTLRG FSFIDAVKRL VEAECPGVVS  CADIIALVAR DAVVVTGGPF WNVPTGRRDG RISNVSEANA DIPAPTSNFT RLQQSFAKKG LDLNDLVLLS GAHTIGVSHC SSFSERLYNF TGTLGTQDPS LDSEYADNLK SRKCKSINDN 
TTIVEMDPGS FKTFDLSYYK LLLKRRGLFQ SDAALTKRTT TKSFIEHLVE GSLKEFYSEF AKAMEKMGRV EVKTGSAGEI RKQCAFVNS 

Retrieve as FASTA  
Remarks Complete sequence from 33 + 11 ESTs (FG179457.1, FG621722.1, FS435214.1, FS413101.1, FS403404.1, FS421871.1...). Cultivar="Hicks Broadleaf"
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTGTAGAGAA ACACATTAAA GAAAAGAAAG GTTTCTTTGA AACAGAGAAA CAATGGCTTC ATTTGGCTAT TTGAGTATTC TGGTATTATG TATCCTTGGA TTTGTAAGCT CTGGACATGC  TCAATTACAA CTTAATTTCT ATGCCAAGAG CTGTCCAAAT GCAGAGAAAA TCATTAAAGA CTTTGTCCAA AAGCAAGTTC CAAAGGCTCC AAATACTGCA GCTGCCATAC TCAGAATGCA  TTTCCATGAT TGCTTTGTTA GGGGTTGTGA TGGATCTGTA CTTCTTAATT TCACTTCAAG TACAGGAAAC CAAACTGAAA AACAAGCTAA TCCTAATCTA ACATTGAGAG GCTTCTCCTT  CATTGATGCT GTGAAGAGAC TAGTTGAAGC TGAATGCCCT GGAGTTGTCT CTTGTGCTGA TATTATTGCC TTAGTTGCTA GAGATGCAGT TGTAGTCACA GGAGGTCCTT TTTGGAATGT  GCCAACAGGT AGAAGAGATG GAAGAATATC AAATGTTTCA GAAGCCAATG CTGATATCCC AGCTCCAACT AGTAACTTCA CTAGACTACA ACAATCTTTT GCGAAAAAGG GTCTTGATCT  GAACGACTTG GTCTTATTAT CTGGTGCACA CACCATTGGA GTTTCTCATT GCTCCTCGTT TTCGGAGCGT CTATACAATT TCACAGGGAC TCTTGGTACA CAAGATCCAT CTCTAGACAG  CGAATATGCA GATAATCTCA AGTCCAGAAA ATGCAAGTCA ATTAACGATA ATACCACTAT AGTTGAGATG GATCCAGGTA GTTTCAAGAC ATTTGATCTT AGCTATTACA AGCTTCTGCT  CAAAAGGAGA GGCCTATTCC AATCTGATGC AGCTTTAACA AAACGTACCA CAACGAAGTC ATTTATCGAA CACCTTGTCG AGGGATCACT CAAAGAATTC TACAGTGAAT TTGCTAAGGC  AATGGAGAAA ATGGGGAGAG TTGAAGTTAA AACAGGCAGT GCTGGTGAAA TCAGGAAGCA ATGTGCATTT GTGAATAGTT AAAAGTTCAC TTTTCTTTAT TATTTCAAGT TTAAATTAAT 
GATTTTGTGA ATGTATT 

Retrieve as FASTA