Entry information : NtPrx21-1A (NtPrx21a)
Entry ID 7212
Creation 2010-02-12 (Christophe Dunand)
Last sequence changes 2011-04-15 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-15 (Christophe Dunand)
Peroxidase information: NtPrx21-1A (NtPrx21a)
Name (synonym) NtPrx21-1A (NtPrx21a)
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx21-1A
start..stop
S start..stop
NtPrx21-1B 556 0 15..298 18..299
StPrx49 494 2e-178 20..298 1..277
LePrx33 481 2e-173 20..294 1..273
LePrx100 480 5e-173 20..294 1..273
Literature and cross-references NtPrx21-1A (NtPrx21a)
DNA ref. GenBank:   FI030377.1 [5' end]
EST ref. GenBank:   EB684025.1 [5' end]
Cluster/Prediction ref. UniGene:   Nta.12492
Protein sequence: NtPrx21-1A (NtPrx21a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   298
PWM (Da):   %s   32331.53 Transmb domain:   %s   i21-40o
PI (pH):   %s   8.77
Sequence
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Send to Peroxiscan
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VSRNTTKERT YLLLKIRNKM ATLGYLCSLI LMCILGLLGS SDAQLQPNFY AKSCPKAEKT IQDYVQKHIP NAPSLAAALI RMHFHDCFVR GCDASVLLNS TSSTGNQTEK VGIPNQTLRG  FDFIDAVKKV VEAECPGVVS CADIVALIAR DSVVATGGPY WNVPTGRRDG RISNVSETTD IPAPFNNLSS LQTSFAKKGL DLKDLVLLSG AHTIGISHCS SFSTRLYNFT GTFGTQDPSL 
DSEYAANLKA KKCKSLDDNT TKVEMDPGSS RTFDLSYYKL LLKRRGLFQS DAALTTTT 

Retrieve as FASTA  
Remarks Partial sequence from 6 ESTs. 3' end is missing. Unigene compiles ESTs from both alleles.
cDNA
Send to BLAST
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GTGTCAAGAA ACACAACAAA GGAAAGAACA TATCTCCTTT TGAAGATTAG AAACAAAATG GCTACATTAG GCTATTTGTG TTCTTTAATA TTGATGTGTA TTCTAGGACT CCTAGGATCA  AGCGATGCTC AATTGCAACC AAACTTTTAT GCAAAGAGCT GTCCAAAAGC AGAGAAGACC ATTCAAGACT ATGTCCAGAA GCACATTCCA AATGCTCCAT CTCTTGCCGC TGCCTTAATT  AGAATGCATT TTCATGATTG CTTTGTCAGG GGTTGCGATG CTTCAGTGCT CCTGAATTCA ACATCAAGTA CAGGAAACCA GACCGAAAAA GTAGGAATCC CTAATCAAAC ACTGAGAGGC  TTCGATTTCA TTGATGCTGT GAAAAAAGTA GTTGAAGCTG AATGTCCTGG AGTAGTCTCT TGTGCCGATA TCGTTGCATT GATTGCTAGA GACTCTGTTG TGGCCACTGG AGGCCCTTAT  TGGAATGTGC CAACTGGGAG AAGAGATGGA AGAATCTCTA ACGTTTCAGA AACCACAGAT ATTCCAGCTC CATTCAATAA CTTATCTAGT CTCCAGACTT CTTTTGCTAA GAAGGGCCTT  GACCTCAAAG ACTTGGTTCT ATTATCTGGT GCTCATACCA TTGGAATCTC TCATTGCTCA TCATTTTCAA CACGTTTATA CAATTTCACT GGAACTTTTG GTACTCAAGA TCCATCTTTA  GACAGTGAGT ATGCAGCTAA CCTTAAGGCC AAAAAATGCA AATCGCTCGA TGATAACACA ACAAAAGTTG AGATGGACCC AGGGAGTTCC AGGACATTTG ATCTTAGCTA TTACAAGCTT 
CTACTCAAAA GGAGAGGCCT CTTTCAATCT GATGCTGCCT TGACAACTAC TACTA 

Retrieve as FASTA