Entry information : RmaKat
Entry ID 7232
Creation 2010-02-22 (Marcel Zamocky)
Last sequence changes 2010-02-22 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-02-23 (Christophe Dunand)
Peroxidase information: RmaKat
Name RmaKat
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Bacteroidetes/Chlorobi Sphingobacteria Rhodothermaceae Rhodothermus
Organism Rhodothermus marinus (Rhodothermus obamensis)    [TaxId: 29549 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RmaKat
start..stop
S start..stop
NOpuKat01 680 0 9..484 7..485
HaurKat01 652 0 8..488 6..485
PpuKat01 627 0 9..484 5..479
PpuKat02 626 0 9..484 5..479
Literature and cross-references RmaKat
Literature Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Mikhailova N., Ovchinnikova G., Saunders E., Brettin T., Detter J.C., Han C., Larimer F. , Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pomrenke H., Schneider S., Tindal B., Goeker M., Klenk H.-P., Eisen J.A. The complete chromosome of Rhodothermus marinus DSM 4252. US DOE Joint Genome Institute (JGI-PGF)
Protein ref. UniProtKB:   D0MGT5
DNA ref. GenBank:   CP001807 (3226579..3225083)
Protein sequence: RmaKat
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   498
PWM (Da):   %s   56978.42  
PI (pH):   %s   6.77
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEARKAPRLT TADGRPIGDN QNALTAGPRG PLLIQDVQLL EQIQHFNRER IPERVVHAKG SGAYGTFTVT NDVTRYTKAA FLSEVGKQTE VFVRFSTVAG ERGAADAERD VRGFAVKFYT  EEGNFDLVGN NTPVFFVRDP YKFQMFIHSQ KRHPKTNLRD PDMQWDFWSL CPESLHQVTI LFSDRGIPAS YRHMNGYGSH TYSMYNDRGE LFWVKFHFKT QQGIKCLTDE EAARLIGEDR  ETHQRDLYEA IERGDYPRWT LYIQVMTPEQ AENFRWNPFD LTKVWPHAEF PLIEVGVLEL NRNPENYFAE VEQAAFKPSA FVPGIGPSPD KMLQARLMSY ADAHRYRLGV NYQQLKVNRP  RCPVHHYQRD GFMAQIEGSG HPNYFPNSIP GSPQDDPIYK EPAWHLGEVI VDRYDSRKDH DDYTQAGNLY RLFDEGQKDR LARAIAASLG QARLEVQKRQ LGHFYRADVD YGRRVARALG 
FDPAAIEAEL GIDASVAG 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 43812/DSM 4252/ R-10".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGCTC GGAAAGCACC GCGTCTGACC ACGGCCGACG GTCGGCCGAT CGGCGACAAC CAGAACGCGT TGACGGCGGG ACCGCGGGGC CCGCTGCTCA TCCAGGATGT GCAGCTGCTG  GAGCAGATCC AGCACTTCAA CCGGGAGCGC ATCCCGGAGC GCGTCGTGCA CGCCAAGGGA AGCGGCGCCT ACGGCACCTT CACCGTCACG AACGACGTGA CCCGCTACAC GAAGGCGGCC  TTCCTGTCGG AGGTGGGCAA GCAGACCGAG GTGTTCGTGC GCTTTTCGAC GGTGGCGGGC GAGCGGGGCG CTGCCGACGC CGAACGGGAC GTGCGGGGCT TCGCCGTGAA GTTCTACACC  GAAGAAGGCA ACTTCGACCT GGTCGGCAAC AACACGCCGG TCTTCTTCGT GCGCGATCCC TACAAATTCC AGATGTTCAT CCACTCGCAG AAGCGGCACC CGAAGACGAA CCTTCGGGAT  CCCGACATGC AGTGGGACTT CTGGTCGCTC TGCCCCGAGT CGCTGCACCA GGTGACGATT CTTTTCTCTG ATCGCGGGAT TCCGGCCTCG TACCGCCACA TGAACGGCTA CGGCAGCCAC  ACCTATTCGA TGTACAACGA TCGGGGCGAG CTTTTCTGGG TCAAGTTCCA TTTCAAGACG CAGCAGGGCA TCAAGTGCCT GACCGACGAA GAGGCCGCGC GCCTGATCGG TGAGGATCGG  GAAACGCACC AGCGGGACCT CTACGAGGCG ATCGAGCGGG GCGACTATCC GCGCTGGACG CTTTACATCC AGGTGATGAC GCCGGAGCAG GCCGAGAACT TCCGCTGGAA TCCGTTCGAT  CTGACGAAGG TCTGGCCGCA CGCCGAGTTT CCGCTGATCG AGGTCGGCGT GCTGGAGCTG AATCGCAACC CGGAAAACTA TTTCGCCGAG GTCGAGCAGG CGGCCTTCAA GCCCAGCGCG  TTCGTGCCGG GCATCGGGCC CAGCCCCGAC AAAATGCTCC AGGCCCGGCT GATGAGCTAT GCCGATGCGC ACCGTTACCG GCTGGGGGTC AACTACCAGC AGCTGAAGGT CAACCGGCCG  CGTTGCCCGG TGCACCACTA TCAGCGGGAC GGTTTCATGG CGCAGATCGA GGGCTCGGGG CACCCGAACT ACTTCCCGAA TTCGATTCCC GGCTCGCCGC AGGACGATCC AATCTACAAG  GAGCCGGCCT GGCACCTGGG CGAGGTGATC GTCGATCGGT ACGACAGCCG GAAGGATCAC GACGACTACA CGCAGGCGGG TAACCTCTAC CGCCTGTTCG ACGAGGGCCA GAAGGATCGC  CTGGCGCGGG CCATTGCCGC GAGCCTGGGC CAGGCGCGCC TGGAGGTGCA GAAACGCCAG CTCGGGCACT TCTACCGGGC CGATGTGGAC TATGGCCGGC GGGTTGCCCG GGCGCTGGGC 
TTCGATCCGG CCGCCATCGA AGCGGAACTG GGCATCGACG CTTCGGTCGC CGGCTGA 

Retrieve as FASTA