Entry information : NtPrx12-1B (NtPrx12b)
Entry ID 7243
Creation 2010-02-23 (Christophe Dunand)
Last sequence changes 2010-02-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-02-23 (Christophe Dunand)
Peroxidase information: NtPrx12-1B (NtPrx12b)
Name (synonym) NtPrx12-1B (NtPrx12b)
Class Class III peroxidase    [Orthogroup: Prx068]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx12-1B
start..stop
S start..stop
NtPrx13-1A_ALT301 675 0 1..360 1..360
NtPrx12-1A 673 0 1..360 1..360
NtPrx13-1A 649 0 32..360 1..329
NtPrx27-1A 597 0 1..360 1..358
Literature and cross-references NtPrx12-1B (NtPrx12b)
DNA ref. GenBank:   FH673678.1 [3' end]
EST ref. GenBank:   FG155339.1 [5' end]   FG162403.1 [3' end]
Protein sequence: NtPrx12-1B (NtPrx12b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360 (340)
PWM (Da):   %s   38511.26 (36433.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.86 (6.26) Peptide Signal:   %s   cut: 21 range:21-360
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFRLSHLSL ALSLVALALA GVAIYRNTYE AMSKGFQTLS PEFDLLESAA SILTLNNNAD QQNSDSKLTQ PLSPSACIFS AVRGVVNSAI DRERRMGASL IRLHFHDCFV DGCDGGVLLD  DIPGSFQGEK TSPPNNNSAR GFEVIEQAKQ RVKDTCPNTP VSCADILAIA ARDSVVKLGG QGYNVALGRR DARTANFTGA LTQLPAPFDN LTVQLRKFND KNFNAREMVA LAGAHTVGFA  RCATVCNSNN VNPAARLQCN CSVTQNDTNL QQLDITPAVF DRVYFQDLNR NQGILFSDQV LTGNTTTAAI VTTYSNNGAV FFGDFAAAMI KMGNLPPSQG VQLEIRDVCS RVNPSSVASM 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (FG171312.1, FG171819.1, FG156789.1, FG150216.1, FG158581.1, FG165409.1, FG155406.1, FG157534.1, FG187239.1)
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCCCGGGATG GCTTTTCGTT TGAGTCATTT GAGCCTTGCC CTGAGCCTTG TGGCTCTTGC ACTTGCAGGT GTTGCCATTT ATAGGAACAC TTACGAAGCC ATGAGTAAGG GATTCCAAAC  ACTTTCTCCA GAGTTTGATC TGCTGGAGTC AGCAGCCAGC ATTTTAACCC TAAATAATAA TGCTGATCAG CAAAATTCAG ACAGCAAGTT AACTCAACCA TTATCTCCAT CGGCATGCAT  CTTCTCGGCT GTTCGAGGAG TTGTAAACAG TGCAATTGAT AGAGAAAGAC GCATGGGAGC TTCTCTCATT CGTCTCCACT TCCATGACTG CTTTGTTGAT GGTTGCGATG GAGGAGTTCT  TCTAGACGAT ATTCCCGGAT CATTCCAAGG GGAAAAAACC TCACCACCCA ACAACAACTC AGCCAGAGGT TTTGAAGTCA TAGAACAAGC TAAACAAAGA GTAAAAGATA CTTGTCCCAA  CACGCCTGTA TCTTGCGCAG ACATCTTAGC TATTGCTGCT CGGGATTCTG TTGTTAAACT AGGAGGACAG GGCTATAACG TTGCACTAGG GAGAAGAGAT GCAAGAACGG CCAACTTCAC  TGGTGCTTTA ACTCAGCTTC CAGCTCCATT CGATAATCTA ACCGTCCAAT TAAGAAAATT TAATGACAAA AACTTTAATG CCCGGGAAAT GGTGGCGCTA GCCGGTGCAC ACACGGTGGG  TTTCGCCAGG TGCGCCACCG TGTGCAACAG CAACAATGTT AACCCAGCGG CACGCCTTCA ATGCAACTGC TCCGTCACCC AAAACGACAC CAACTTGCAA CAATTGGATA TAACTCCTGC  TGTGTTCGAC AGAGTTTACT TCCAGGACTT AAACAGGAAC CAGGGCATAC TTTTCTCGGA TCAAGTGTTG ACGGGGAATA CCACCACTGC TGCTATTGTA ACAACCTACA GCAATAATGG  TGCTGTTTTC TTTGGAGATT TTGCTGCTGC TATGATCAAG ATGGGAAACT TGCCTCCCTC ACAGGGCGTT CAATTGGAAA TTCGTGATGT TTGTAGCAGG GTCAATCCCA GCTCTGTGGC  TTCTATGTAA AAGGAAAACT TGAATTTGGC AAAAAGGAAT TCATGAACTC ACTATTAGTC GGTTGATGTT TTCTTAAAAT AAAAGAATCA CTGGTTCCAG AATGTGGTTC TAGTATTTGT 
TTTATAATTT GTAGTAATAT TTGGTTTCGC TCTTCTTGTA TAATCATTTG ATTCCATGTA TAACTTCCAA AATTA 

Retrieve as FASTA