Entry information : NtPrx13-1A (NtPrx13a)
Entry ID 7250
Creation 2010-02-24 (Christophe Dunand)
Last sequence changes 2010-02-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-02-24 (Christophe Dunand)
Peroxidase information: NtPrx13-1A (NtPrx13a)
Name (synonym) NtPrx13-1A (NtPrx13a)
Class Class III peroxidase    [Orthogroup: Prx068]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx13-1A
start..stop
S start..stop
NtPrx13-1A_ALT301 666 0 1..329 32..360
NtPrx12-1A 663 0 1..329 32..360
NtPrx12-1B 647 0 1..329 32..360
NtPrx27-1A 554 0 1..329 32..358
Literature and cross-references NtPrx13-1A (NtPrx13a)
EST ref. GenBank:   EH618395.1 [5' end]   EB443136.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.19809
Protein sequence: NtPrx13-1A (NtPrx13a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   35116.44  
PI (pH):   %s   6.26
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSKGFQTLSP ELDLLESAAS ILTLNNNNAE QNSDSKLTQP LSPSACIFSA VRGVVNSAID RERRMGASLI RLHFHDCFVD GCDGGVLLDD IPGSFQGEKT SPPNNNSARG FEVIEQAKQR  VKDTCPNTPV SCADILAIAA RDSVVKLGGQ GYNVALGRRD ARAANFTGAL TQLPAPFDNL TVQIRKFNDK NFNAREMVAL AGAHTVGFTR CATACNSNNV NPAARLQCNC SVTQNDTNLQ 
QLDTTPAVFD RVYFQDLNRN QGILFSDQVL TGNTTTAAIV TTYSNNGAVF LGDFAAAMIK MGNLPPSPGV QLEIRDVCSR VNPSSVAFM 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (FG149240.1, FG162851.1, EH618059.1, EH623632.1, EH623597.1) and GSS. Cultivar="K326".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGGGAGTCA TTTGAGCCTT GCCCTGAGCC TTTTGGCTCT TGCACTTGCA GGTGTTGCCA TTTATAGGAA CACTTATGAA GCCATGAGTA AGGGATTCCA AACACTTTCT CCAGAGTTAG  ATCTGCTGGA GTCAGCAGCC AGCATTTTAA CCCTAAATAA TAATAATGCT GAGCAAAATT CAGACAGCAA GTTAACTCAA CCATTATCTC CATCGGCATG CATCTTCTCG GCTGTTCGAG  GAGTTGTGAA CAGTGCAATT GATAGAGAAA GGCGCATGGG AGCTTCTCTC ATTCGTCTCC ACTTCCATGA CTGCTTTGTT GATGGTTGCG ATGGAGGAGT TCTTCTAGAC GATATTCCCG  GATCATTCCA AGGGGAAAAG ACCTCACCAC CCAACAACAA CTCAGCCAGA GGTTTTGAAG TCATAGAACA AGCTAAACAA AGAGTAAAAG ATACTTGTCC CAACACGCCT GTATCTTGCG  CAGACATCTT AGCTATTGCT GCTCGTGATT CTGTTGTTAA ACTAGGAGGA CAAGGCTATA ACGTTGCACT TGGGAGAAGA GATGCAAGAG CGGCCAACTT CACTGGTGCT TTAACTCAGC  TTCCAGCTCC GTTCGACAAT CTAACCGTCC AAATAAGAAA ATTTAATGAC AAAAACTTTA ATGCCCGGGA AATGGTGGCG CTAGCCGGTG CCCACACGGT GGGCTTCACC AGGTGCGCCA  CCGCGTGCAA CAGCAACAAC GTTAACCCAG CGGCACGTCT TCAATGCAAC TGCTCCGTCA CCCAAAACGA CACCAACTTG CAACAACTGG ATACAACTCC TGCTGTGTTC GACAGAGTTT  ACTTCCAGGA CTTAAACAGG AACCAGGGCA TACTTTTCTC GGATCAAGTG TTGACGGGGA ATACCACCAC TGCTGCTATT GTTACGACCT ACAGCAATAA TGGTGCTGTT TTCCTGGGAG 
ATTTTGCTGC TGCTATGATC AAGATGGGAA ACTTGCCTCC CTCACCGGGC GTTCAATTGG AAATTCGTGA TGTTTGTAGC AGGGTCAATC CCAGCTCTGT GGCTTTTATG TG 

Retrieve as FASTA