Entry information : NtPrx27-1A (NtPrx27a)
Entry ID 7251
Creation 2010-02-24 (Christophe Dunand)
Last sequence changes 2010-02-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-02-24 (Christophe Dunand)
Peroxidase information: NtPrx27-1A (NtPrx27a)
Name (synonym) NtPrx27-1A (NtPrx27a)
Class Class III peroxidase    [Orthogroup: Prx065]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx27-1A
start..stop
S start..stop
NtPrx12-1B 593 0 1..358 1..360
NtPrx13-1A_ALT301 577 0 1..358 1..360
NtPrx12-1A 575 0 1..358 1..360
StPrx72 563 0 1..358 1..363
Literature and cross-references NtPrx27-1A (NtPrx27a)
EST ref. GenBank:   FG162989.1 [5' end]   FG163061.1 [3' end]
Protein sequence: NtPrx27-1A (NtPrx27a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358 (338)
PWM (Da):   %s   38192.96 (36255.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.32 (5.09) Peptide Signal:   %s   cut: 21 range:21-358
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFGASHLSL ALSLVALALA GVAIYRNTYE AMNMGLQKLS PNFDLSESSV SILTLNNNVD QQNSHKLSQQ SPESCVFSAV RGVVDSAIDT ERRMGASLIR LHFHDCFVDG CDGGILLDDI  AGSFQGEQTS IPNNNSVRGF AVIAQAKQSV KDTCPNTSVS CADILAIAAR DSVVKLGGQT YDIALGRRDA RTANFTGALT QLPAPFDNLT VQITKFSDKN FTVREMVALV GAHTVGFTRC 
VTVCVSTNVN PAARLSCNCS VTQNNTNLQQ LDTTPTVFDK VYYEDLNRNQ GILFSDQVLT GNTTTAAIVT TYSNDSNVFF GDFAAAMIKM GNLPPSQGVQ LEIRDVCSRV NPSSLASM 

Retrieve as FASTA  
Remarks Complete sequence from 9 ESTs (FG161949.1, FG158108.1, FG152699.1, FS434435.1) and GSS (introns 1 and 2). Cultivar="Hicks Broadleaf".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGATCAAGA AGCTAGCTAG CTTTGGTTTC TTAGATATAT ATTCCTTAGA CATTTCATTG ATCACTAGAT CATGGCTTTT GGTGCGAGTC ATTTGAGCCT TGCACTGAGC CTTGTGGCAC  TTGCACTTGC AGGTGTTGCT ATTTATAGGA ACACTTATGA AGCCATGAAT ATGGGACTCC AAAAGCTCTC TCCAAATTTT GATTTGTCGG AGTCATCAGT CAGCATTTTA ACTCTAAATA  ATAATGTCGA TCAGCAAAAT TCACACAAGT TGAGCCAGCA ATCTCCAGAA TCATGCGTCT TCTCAGCTGT TCGCGGAGTT GTAGACAGTG CTATTGACAC AGAAAGACGC ATGGGAGCTT  CTCTCATTCG TCTCCATTTC CACGACTGCT TTGTTGATGG TTGCGATGGA GGTATTCTTC TAGATGATAT TGCTGGATCA TTCCAAGGAG AACAAACCTC AATACCCAAC AACAACTCAG  TCAGAGGTTT TGCAGTCATA GCACAAGCTA AACAAAGTGT AAAGGATACT TGTCCCAACA CATCTGTTTC TTGTGCAGAC ATCTTAGCCA TTGCTGCTCG TGATTCTGTT GTTAAACTAG  GAGGACAAAC ATATGACATT GCTCTGGGGA GAAGAGATGC AAGAACGGCC AACTTCACTG GTGCTTTAAC TCAACTTCCA GCTCCATTCG ACAACCTAAC AGTTCAAATC ACGAAATTCA  GTGACAAAAA CTTTACTGTC CGGGAAATGG TGGCGCTAGT CGGTGCACAC ACTGTGGGAT TCACCAGGTG TGTCACTGTG TGCGTCAGCA CCAACGTTAA CCCGGCTGCA CGTCTTTCCT  GCAACTGCTC CGTCACTCAA AACAACACCA ACTTGCAACA ATTGGACACC ACTCCTACTG TGTTCGACAA AGTATACTAC GAGGATTTAA ACAGGAACCA GGGGATACTT TTCTCTGATC  AAGTATTGAC GGGGAATACC ACAACTGCTG CTATTGTAAC AACCTATAGC AATGATAGTA ACGTTTTCTT TGGAGATTTT GCAGCTGCCA TGATCAAGAT GGGAAACTTG CCTCCCTCAC  AGGGCGTTCA ATTGGAAATT CGTGATGTTT GCAGCAGAGT CAATCCCAGT TCTCTAGCTT CTATGTGAAA GGAACACTTG AATTTGGAAA AAAGGAACTA AACTCGTTAT TAGTTGCTTG 
CTTGGTGTTT TCTTCAAAAT AAAAGAATCA CTGTCTCCAG AATGTTGCTC TAGT 

Retrieve as FASTA