Entry information : NtPrx27-1B (NtPrx27b)
Entry ID 7253
Creation 2010-02-24 (Christophe Dunand)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtPrx27-1B (NtPrx27b)
Name (synonym) NtPrx27-1B (NtPrx27b)
Class Class III peroxidase     [Orthogroup: Prx051]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx27-1B
start..stop
S start..stop
NtPrx27-1A 394 8e-140 1..215 1..215
StPrx72 346 6e-121 1..215 1..220
NtPrx12-1B 342 2e-119 1..215 1..217
LePrx76 338 1e-117 1..215 1..221
Literature and cross-references NtPrx27-1B (NtPrx27b)
EST ref. GenBank:   FG145150.1 [5' end]   FH186870.1 [5' end]
Protein sequence: NtPrx27-1B (NtPrx27b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   215 (195)
PWM (Da):   %s   22849.41 (20813.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.78 (4.52) Peptide Signal:   %s   cut: 21 range:21-215
Sequence
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Send to Peroxiscan
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MAFRASHLSL ALSLVALALA GVAIYRNTYE AMNMGLQKLS PNFELSESAV SILTLNNNVD QQNSHELSQQ SPESCVFSAV RGVVDSAIDT ERRMGASLIR LHFHDCFVDG CDGGILLDDI 
AGSFQGEQTS PPNDNSARGY EVIAQAKQSV KDTCPNISVS CADILAIAAR DSVVKLGGQT YNIALGRRDA RTANFTGALT QLPAPFDNLT VQITK 

Retrieve as FASTA  
Remarks Partial sequence from GSS (introns 1 and 2) and 2 ESTs (FH728062.1).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTTC GTGCAAGTCA TTTGAGCCTT GCCCTGAGCC TTGTGGCACT TGCACTAGCA GGTGTTGCTA TTTATAGGAA CACTTATGAA GCCATGAATA TGGGACTCCA AAAGCTCTCT  CCTAATTTTG AGTTGTCGGA GTCGGCAGTC AGCATTTTAA CTCTAAATAA TAATGTTGAT CAGCAAAATT CACACGAGTT GAGTCAGCAA TCTCCAGAAT CATGCGTCTT CTCAGCTGTT  CGAGGAGTTG TGGATAGTGC TATTGACACA GAAAGACGCA TGGGAGCTTC TCTCATTCGT CTCCATTTCC ACGACTGCTT TGTTGATGTA AATAATTCCT TCACCTCTTC AATTTCTACT  GCTCTCGACG TTTTTTACTC TCTACCCTTT CTACTTTTTT AAAAAAATGT GACACTAAAT ACTTGATTTA TCATTAGCTC GTTTTTATTA TTCTCATCCT GACTTTCTGT GTAGCTATGC  TGACCAAAGC TTACACTTCG ATCATTTTAT TATTACTTCA TGTCACATTG GTTAACCAGC TTAAAGCGAC ATTAGATAGT TGACTAATAA CTACTCCTAT GTTTTATTAA CTAGGGTTGC  GATGGAGGTA TTCTTCTAGA TGATATTGCT GGATCATTCC AAGGAGAACA AACCTCACCA CCCAACGACA ACTCAGCCAG AGGTTATGAA GTCATAGCAC AAGCTAAACA AAGTGTAAAA  GATACTTGTC CCAACATATC TGTTTCTTGT GCAGACATCT TAGCCATTGC TGCTCGTGAT TCTGTTGTTA AAGTAAGTCC ATTATTTTCT ATCACGTTGC TTAGAGTTTA TGTTGACATA 
CACATAGGTA ATTAGTATTG GTATTTGAAA ATAAGTAATA ACCGTTATAG TCGGTAAATT ATATTGATAG TGTGAAAACA TTCTATTGTA CGAGTAGC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAACATGGGT CTAGGGGAAA GGAGAGAATC ATAAAATAAA ATATTTTTTT AAAAGGAAAT TTCTGCTCTT TAACCAAAGA AAAATATTTT CGAAATTTCT TTTCCACTCA CCAACCAAAC  AAAAAATAAA TAAATGATGA AATCACTCAT TTTTCATGAA ACAATATTTT TCATACCAAA CACACCCATG GTAAAGAAGC ACACCTAACA CGGTTGAACG ACAATAGTAA TAAAAGACAA  TTCTACACCA ATGGATTCTT AGTTTATTTG TTCTTTTACT TTCAATTAAT TTTAAAGCAG AATAATGACT AATTGTTAGC TAGTCCTCAC TAGCTCCCTA CAAATAGAAG CAAAAATAAA  AGCAAAATCA TCCGCAAAGA CACATATCCT CAAGAAGCTA GCTTTTGGTT TCTTAGATAT TCCATAGACA ATTCATTGAT CACTAGATCA TGGCTTTTCG TGCAAGTCAT TTGAGCCTTG  CCCTGAGCCT TGTGGCACTT GCACTAGCAG GTGTTGCTAT TTATAGGAAC ACTTATGAAG CCATGAATAT GGGACTCCAA AAGCTCTCTC CTAATTTTGA GTTGTCGGAG TCGGCAGTCA  GCATTTTAAC TCTAAATAAT AATGTTGATC AGCAAAATTC ACACGAGTTG AGTCAGCAAT CTCCAGAATC ATGCGTCTTC TCAGCTGTTC GAGGAGTTGT GGATAGTGCT ATTGACACAG  AAAGACGCAT GGGAGCTTCT CTCATTCGTC TCCATTTCCA CGACTGCTTT GTTGATGGTT GCGATGGAGG TATTCTTCTA GATGATATTG CTGGATCATT CCAAGGAGAA CAAACCTCAC  CACCCAACGA CAACTCAGCC AGAGGTTATG AAGTCATAGC ACAAGCTAAA CAAAGTGTAA AAGATACTTG TCCCAACATA TCTGTTTCTT GTGCAGACAT CTTAGCCATT GCTGCTCGTG  ATTCTGTTGT TAAACTAGGA GGACAAACCT ATAACATTGC ACTGGGGAGA AGAGATGCAA GAACGGCCAA CTTCACCGGT GCTTTAACTC AGCTTCCAGC TCCATTCGAC AACCTTACCG 
TCCAAATCAC GAAA 

Retrieve as FASTA