Entry information : NtPrx28-1A (NtPrx28a)
Entry ID 7263
Creation 2010-02-25 (Christophe Dunand)
Last sequence changes 2010-02-25 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-02-25 (Christophe Dunand)
Peroxidase information: NtPrx28-1A (NtPrx28a)
Name (synonym) NtPrx28-1A (NtPrx28a)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx28-1A
start..stop
S start..stop
NtPrx28-1B 394 1e-140 1..198 1..198
LePrx19 355 2e-125 7..198 19..210
StPrx07 353 1e-124 1..198 5..204
PpePrx32 297 1e-102 19..198 22..201
Literature and cross-references NtPrx28-1A (NtPrx28a)
EST ref. GenBank:   FG199340.1 [5' end]
Protein sequence: NtPrx28-1A (NtPrx28a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   198 (181)
PWM (Da):   %s   21381.95 (19432.0)  
PI (pH):   %s   8.77 (9.14) Peptide Signal:   %s   cut: 18 range:18-198
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MILPYIFLCC VFHLVSAQLR VGFYNSTCPQ AETIVRQAVQ NQFNSDRSIT AALLRMHFHD CFVRGCDASI LIKSTKSKQS ERNAGPNQTV RGFELIDKIK KSIETLCPST VSCADIITLA 
TRDAVALAGG PSYAIPTGRR DGLVSNAADV NLPGPSFTVP QALQSFTNKG LSLNDMVTLL GAHTVGVARC NFFQNRLS 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs (FG633983.1, AM846023.1). 3'end is missingCultivar="Hicks Broadleaf"
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TAGAACAAGT CGGTCCGGAA TTCCCGGGAT CCAGAATACA CTGTACAAAC TATCTTCAAT TTGTAGAAAA CTCTCTCAGA AACATCCTTC TGTTCTGTGA AAATGATATT ACCATATATA  TTTCTCTGTT GTGTTTTTCA TTTAGTTTCA GCTCAACTTC GAGTTGGCTT TTACAATTCT ACCTGTCCAC AAGCTGAAAC TATTGTACGA CAAGCTGTGC AAAACCAGTT CAATAGCGAC  CGTTCCATCA CTGCAGCTCT GCTTCGCATG CATTTTCATG ACTGCTTTGT GAGAGGTTGT GATGCATCCA TACTCATAAA GTCAACAAAG TCTAAGCAAT CGGAAAGAAA CGCTGGACCA  AATCAAACAG TACGAGGTTT CGAGCTTATA GATAAAATTA AGAAAAGCAT AGAAACATTA TGCCCATCAA CCGTTTCATG CGCTGACATA ATAACACTAG CAACGCGGGA TGCAGTAGCG  CTAGCTGGAG GTCCTAGCTA TGCCATTCCA ACTGGAAGGC GAGATGGCCT GGTTTCAAAT GCAGCAGATG TAAACTTGCC AGGTCCATCA TTTACAGTTC CACAAGCCCT CCAATCGTTC 
ACAAACAAAG GGCTGTCCTT AAATGATATG GTGACCCTAT TAGGAGCTCA CACTGTCGGA GTTGCACGCT GTAATTTTTT 

Retrieve as FASTA