Entry information : NtPrx18-1B (NtPrx18b)
Entry ID 7266
Creation 2010-02-25 (Christophe Dunand)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtPrx18-1B (NtPrx18b)
Name (synonym) NtPrx18-1B (NtPrx18b)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx18-1B
start..stop
S start..stop
NtPrx18-1A 564 0 1..327 1..319
StPrx08 510 0 1..327 1..322
LePrx46 508 0 1..327 1..322
VvPrx31 498 1e-179 1..327 1..327
Literature and cross-references NtPrx18-1B (NtPrx18b)
DNA ref. GenBank:   FI019049.1 [Fragment]
EST ref. GenBank:   AM792701.1 [3' end]
Protein sequence: NtPrx18-1B (NtPrx18b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (301)
PWM (Da):   %s   35942.55 (33035.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.73 (9.73) Peptide Signal:   %s   cut: 27 range:27-327
Sequence
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Send to Peroxiscan
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MAFSRHIVVL ILQLMLVPLA FNLCNAQGLK YGFYRKTCPR VESIVRETTA QYISKAPTLA APLLRMQFHD CFVRGCDGSV MLNSTKTNQA ERDAIPNQSL RGFQVINGVK SALENKCPGV  VSCADIVALV ARDAVSMIKG PYWKVPLGRR DGRVSNMLEA LNLLPAPFAN ISSLKAQFVS LGLNAKDLVV LSGGHTIGTS HCFSFTNRMY NFTGNGDADP TMDPNYIARL KLKCSPTDVT 
TLVEMDPGSF KIFDEKYYTL VAKRRGLFQS DSALLDDIET KAYVKRQALT HGKTFFKDFG KSMVKMGKIG VLTGQAGEIR KHCDFVN 

Retrieve as FASTA  
Remarks Complete sequence from 1 EST and GSS (3 introns). Cultivar="SNN"
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACGACATGCT CTGTAGTCAT AGAAATGTGT GGAATGTTTA GGACATAGTT CTAGATGTAC TTTATATGTA TCAAAGTTTT TATTCTAATT TCTATGGATG AAGTAATATT TTTATAGAAA  TTGTTATGGG AAAGGAATGT CTTCTTGACA TACAAAATGG ACTTTTATAG GGATGCGATG GTTCTGTAAT GCTAAACTCA ACCAAGACTA ATCAAGCTGA GAGAGATGCC ATTCCAAACC  AATCTCTAAG AGGATTCCAA GTGATTAATG GTGTAAAATC TGCACTAGAA AACAAGTGTC CAGGTGTTGT ATCTTGTGCA GATATCGTAG CCTTAGTAGC TCGGGATGCA GTTTCTATGG  TAAAATCTCA GTGGATAATA AGCCCGTCCT TTTACCCTTC TTTTATCACA TTGATTTTGA AGTGTTGATT ACATTTATAT AATTTGATTT TATAGATTAA AGGACCATAT TGGAAAGTTC 
CCTTGGGAAG AAGAGATGGG AGAGTGTCAA ACATGTTAGA AGCCTTGAAC CTTTTACCAG CTCCATTTGC TAACATCTCT TCTCTT 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCCTCATGCG GCCGCTAGTT TCTATGATTA AAGGACCATA TTGGAAAGTT CCCCTGGGAA GAAGAGATGG GAGAGTGTCA AACATGTTAG AAGCCTTGAA CCTTTTACCA GCTCCATTTG  CTAACATCTC TTCTCTTAAA GCACAGTTTG TCTCTCTTGG TTTGAATGCA AAAGACCTTG TGGTTCTATC AGGAGGACAT ACCATTGGAA CTTCTCATTG TTTCTCTTTC ACAAACAGAA  TGTACAATTT CACAGGCAAT GGTGATGCTG ATCCAACAAT GGATCCAAAC TACATTGCTC GTTTGAAGCT AAAATGCAGT CCAACTGATG TTACAACACT TGTAGAAATG GATCCAGGAA  GTTTCAAAAT ATTTGATGAA AAATATTACA CACTTGTTGC TAAAAGGAGA GGGCTTTTTC AATCTGATTC TGCACTTCTT GATGATATTG AGACCAAAGC TTATGTTAAA CGTCAAGCTC 
TTACCCATGG TAAAACATTT TTCAAAGATT TTGGTAAATC TATGGTGAAA ATGGGCAAGA TTGGTGTCTT GACTGGTCAA GCTGGTGAAA TCAGGAAACA TTGTGATTTT GTTAATTAA 

Retrieve as FASTA