Entry information : SroseKat01
Entry ID 7271
Creation 2010-02-25 (Marcel Zamocky)
Last sequence changes 2015-11-04 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-04 (Achraf Jemmat)
Peroxidase information: SroseKat01
Name SroseKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Streptosporangiaceae Streptosporangium
Organism Streptosporangium roseum    [TaxId: 2001 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SroseKat01
start..stop
S start..stop
SerKat02 990 0 3..690 2..701
FspKat01_CcI3 947 0 9..680 15..699
SscaKat01 922 0 10..680 2..689
NfaKat01 909 0 9..690 25..719
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6010631..6012703 2073  
join(6010631..6012703)


exon

Literature and cross-references SroseKat01
Literature Lucas S., et al.,. (2009) The complete chromosome of Streptosporangium roseum DSM 43021.US DOE Joint Genome Institute (JGI-PGF). Submitted to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   D2BF90
DNA ref. GenBank:   CP001814.1 (6010631..6012703)
Protein sequence: SroseKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   690
PWM (Da):   %s   75479.82  
PI (pH):   %s   5.66
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTADNRTDKD RQLDEARVGF QDTALTTDQG IRVDDTDNSL KVGERGPTLM EDFHFREKIT HFDHERIPER VVHARGAGAH GYFEVHDDSL AAFTAARFLT TPGLRTPVFT RFSTVAGSRG  SADTVRDVRG FAVKFYTPEG NFDLVGNNMP VFFIQDGIKF PDFVHAVKPE PHNEIPQASS AHDTLWDFVQ LQPETTHMMM WLMSDRALPR SYRMMQGFGV HTFRLVNAEG RGTFVKFHWR  PKLGIHSLVW DETQKIAGKD PDFNRRDLWE AIESGDFPEW ELGVQLVPEE DEHAFDFDLL DATKIIPEEQ VPVRPVGRLV LDRNPDNFFA ETEQIAFHLG NVVPGIDFTN DPLLQARLFS  YLDTQLIRLG GPNFPQIPIN RPVAEVRNHH RDGYHQMTIP QGQASYHPNS LGGGCPAVGG EGAYTHYQER VDGNKIRKRS ESFGDHYSQA TLFWNSMAGW EKEHIVAAFR FELGKVVHLH  IREGVVRNLN QVDHDLAVMV AEGVGVEPPA GAAVPNHGHG SPALSQDHDP VQTVATRKIA ILAADGVDAA QVEGVRTALT TEGAVCEVLA ARDGAVRGAG GEQVPVTRAL NTVASVLYDA 
VVVPGGEASV RALSEDGDAV HFVSEAFKHG KAIGALGAGA ELLEAARIGS PPEPGVVTGA EGDLEGFTSA FAAAAAAHRH PARDSKRIPA 

Retrieve as FASTA  
Remarks strain="DSM 43021"
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCGCCG ACAACCGCAC GGACAAGGAC CGGCAGCTCG ACGAGGCCCG GGTCGGCTTC CAGGACACCG CCCTGACCAC CGATCAGGGC ATCCGGGTGG ACGACACCGA CAACTCGCTC  AAGGTGGGCG AGCGGGGTCC GACGCTGATG GAGGACTTCC ACTTCCGGGA GAAGATCACC CACTTCGATC ACGAGCGGAT CCCCGAACGG GTGGTGCACG CCCGCGGCGC GGGAGCCCAC  GGCTACTTCG AGGTCCACGA CGACTCGCTG GCGGCCTTCA CGGCGGCGCG GTTCCTCACC ACGCCGGGGC TGCGGACGCC GGTCTTCACC CGCTTCTCCA CGGTGGCCGG ATCGCGCGGC  TCCGCCGACA CCGTGCGCGA CGTGCGCGGC TTCGCCGTCA AGTTCTACAC CCCGGAGGGC AACTTCGACC TGGTGGGCAA CAACATGCCG GTCTTCTTCA TCCAGGACGG CATCAAGTTC  CCCGACTTCG TGCACGCGGT GAAGCCCGAG CCGCACAACG AGATCCCGCA GGCCTCCTCG GCGCACGACA CGCTGTGGGA CTTCGTGCAG CTCCAGCCCG AGACCACCCA CATGATGATG  TGGCTGATGT CGGACCGGGC ACTGCCCCGC AGCTACCGGA TGATGCAGGG CTTCGGGGTG CACACCTTCC GCCTCGTCAA CGCCGAGGGC CGGGGCACCT TCGTGAAGTT CCACTGGAGG  CCCAAGCTCG GCATCCACTC GCTCGTCTGG GACGAGACCC AGAAGATCGC CGGCAAGGAC CCCGACTTCA ACCGCAGGGA CCTGTGGGAG GCGATCGAGA GCGGCGACTT CCCCGAGTGG  GAGCTCGGCG TCCAGCTCGT GCCCGAGGAG GACGAGCACG CCTTCGACTT CGACCTCCTG GACGCCACGA AGATCATCCC GGAGGAGCAG GTGCCGGTGC GGCCGGTCGG GCGCCTGGTG  CTCGACCGCA ACCCCGACAA CTTCTTCGCC GAGACCGAGC AGATCGCCTT CCATCTCGGC AACGTCGTGC CCGGCATCGA CTTCACCAAC GACCCGCTGC TGCAGGCCCG GCTGTTCTCC  TATCTGGACA CCCAGCTGAT CAGGCTCGGC GGGCCCAACT TCCCGCAGAT CCCGATCAAC CGGCCGGTGG CCGAGGTGCG CAACCACCAT CGCGACGGCT ACCACCAGAT GACCATCCCG  CAGGGACAGG CGAGCTACCA CCCCAACTCC CTGGGCGGCG GCTGCCCCGC GGTCGGCGGT GAGGGCGCCT ACACGCACTA CCAGGAGCGG GTGGACGGCA ACAAGATCCG CAAGCGCAGC  GAGAGCTTCG GCGACCACTA CAGCCAGGCC ACCCTGTTCT GGAACAGCAT GGCCGGCTGG GAGAAGGAGC ACATCGTCGC GGCCTTCCGC TTCGAACTCG GCAAGGTGGT CCACCTCCAC  ATCCGCGAGG GGGTGGTCCG CAACCTCAAC CAGGTCGACC ACGACCTGGC CGTCATGGTC GCCGAGGGCG TCGGCGTGGA GCCGCCCGCC GGGGCCGCCG TCCCCAACCA CGGCCACGGC  TCCCCGGCCC TCAGCCAGGA CCACGACCCG GTGCAGACCG TCGCGACCAG GAAGATCGCC ATTCTCGCCG CCGACGGCGT CGACGCCGCC CAGGTGGAGG GCGTGCGGAC GGCCCTCACC  ACCGAGGGAG CGGTGTGCGA GGTGCTGGCG GCGCGGGACG GCGCCGTACG GGGCGCGGGC GGCGAGCAGG TCCCGGTGAC CCGCGCGCTG AACACCGTGG CCTCGGTGCT CTACGACGCC  GTGGTGGTGC CCGGCGGGGA GGCGAGCGTG CGGGCGCTGA GCGAGGACGG CGACGCCGTG CACTTCGTCT CCGAGGCGTT CAAGCACGGC AAGGCCATCG GCGCGCTGGG CGCCGGGGCG  GAGCTGCTGG AGGCCGCGCG GATCGGATCC CCGCCGGAGC CGGGGGTCGT CACCGGCGCG GAGGGGGACC TGGAGGGCTT CACCTCGGCC TTCGCCGCGG CGGCCGCCGC GCACCGCCAT 
CCCGCACGCG ACAGCAAGCG GATACCGGCG TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCGCCG ACAACCGCAC GGACAAGGAC CGGCAGCTCG ACGAGGCCCG GGTCGGCTTC CAGGACACCG CCCTGACCAC CGATCAGGGC ATCCGGGTGG ACGACACCGA CAACTCGCTC  AAGGTGGGCG AGCGGGGTCC GACGCTGATG GAGGACTTCC ACTTCCGGGA GAAGATCACC CACTTCGATC ACGAGCGGAT CCCCGAACGG GTGGTGCACG CCCGCGGCGC GGGAGCCCAC  GGCTACTTCG AGGTCCACGA CGACTCGCTG GCGGCCTTCA CGGCGGCGCG GTTCCTCACC ACGCCGGGGC TGCGGACGCC GGTCTTCACC CGCTTCTCCA CGGTGGCCGG ATCGCGCGGC  TCCGCCGACA CCGTGCGCGA CGTGCGCGGC TTCGCCGTCA AGTTCTACAC CCCGGAGGGC AACTTCGACC TGGTGGGCAA CAACATGCCG GTCTTCTTCA TCCAGGACGG CATCAAGTTC  CCCGACTTCG TGCACGCGGT GAAGCCCGAG CCGCACAACG AGATCCCGCA GGCCTCCTCG GCGCACGACA CGCTGTGGGA CTTCGTGCAG CTCCAGCCCG AGACCACCCA CATGATGATG  TGGCTGATGT CGGACCGGGC ACTGCCCCGC AGCTACCGGA TGATGCAGGG CTTCGGGGTG CACACCTTCC GCCTCGTCAA CGCCGAGGGC CGGGGCACCT TCGTGAAGTT CCACTGGAGG  CCCAAGCTCG GCATCCACTC GCTCGTCTGG GACGAGACCC AGAAGATCGC CGGCAAGGAC CCCGACTTCA ACCGCAGGGA CCTGTGGGAG GCGATCGAGA GCGGCGACTT CCCCGAGTGG  GAGCTCGGCG TCCAGCTCGT GCCCGAGGAG GACGAGCACG CCTTCGACTT CGACCTCCTG GACGCCACGA AGATCATCCC GGAGGAGCAG GTGCCGGTGC GGCCGGTCGG GCGCCTGGTG  CTCGACCGCA ACCCCGACAA CTTCTTCGCC GAGACCGAGC AGATCGCCTT CCATCTCGGC AACGTCGTGC CCGGCATCGA CTTCACCAAC GACCCGCTGC TGCAGGCCCG GCTGTTCTCC  TATCTGGACA CCCAGCTGAT CAGGCTCGGC GGGCCCAACT TCCCGCAGAT CCCGATCAAC CGGCCGGTGG CCGAGGTGCG CAACCACCAT CGCGACGGCT ACCACCAGAT GACCATCCCG  CAGGGACAGG CGAGCTACCA CCCCAACTCC CTGGGCGGCG GCTGCCCCGC GGTCGGCGGT GAGGGCGCCT ACACGCACTA CCAGGAGCGG GTGGACGGCA ACAAGATCCG CAAGCGCAGC  GAGAGCTTCG GCGACCACTA CAGCCAGGCC ACCCTGTTCT GGAACAGCAT GGCCGGCTGG GAGAAGGAGC ACATCGTCGC GGCCTTCCGC TTCGAACTCG GCAAGGTGGT CCACCTCCAC  ATCCGCGAGG GGGTGGTCCG CAACCTCAAC CAGGTCGACC ACGACCTGGC CGTCATGGTC GCCGAGGGCG TCGGCGTGGA GCCGCCCGCC GGGGCCGCCG TCCCCAACCA CGGCCACGGC  TCCCCGGCCC TCAGCCAGGA CCACGACCCG GTGCAGACCG TCGCGACCAG GAAGATCGCC ATTCTCGCCG CCGACGGCGT CGACGCCGCC CAGGTGGAGG GCGTGCGGAC GGCCCTCACC  ACCGAGGGAG CGGTGTGCGA GGTGCTGGCG GCGCGGGACG GCGCCGTACG GGGCGCGGGC GGCGAGCAGG TCCCGGTGAC CCGCGCGCTG AACACCGTGG CCTCGGTGCT CTACGACGCC  GTGGTGGTGC CCGGCGGGGA GGCGAGCGTG CGGGCGCTGA GCGAGGACGG CGACGCCGTG CACTTCGTCT CCGAGGCGTT CAAGCACGGC AAGGCCATCG GCGCGCTGGG CGCCGGGGCG  GAGCTGCTGG AGGCCGCGCG GATCGGATCC CCGCCGGAGC CGGGGGTCGT CACCGGCGCG GAGGGGGACC TGGAGGGCTT CACCTCGGCC TTCGCCGCGG CGGCCGCCGC GCACCGCCAT 
CCCGCACGCG ACAGCAAGCG GATACCGGCG TGA 

Retrieve as FASTA