Entry information : BnPrx13-2_other
Entry ID 7337
Creation 2010-05-10 (Christophe Dunand)
Last sequence changes 2010-05-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-05-10 (Christophe Dunand)
Peroxidase information: BnPrx13-2_other
Name BnPrx13-2_other
Class Class III peroxidase     [Orthogroup: Prx017]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx13-2_other
start..stop
S start..stop
BrPrx13-1Ab_other 332 1e-116 1..170 9..178
BnPrx13-1_other 330 6e-116 1..170 9..178
BrPrx13-1Aa_other 270 3e-92 2..170 10..177
TsPrx13 263 2e-89 2..169 10..176
Literature and cross-references BnPrx13-2_other
EST ref. GenBank:   EE442442.1 [5' end]
Protein sequence: BnPrx13-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170 (139)
PWM (Da):   %s   18146.95 (14651.2)  
PI (pH):   %s   4.67 (4.40) Peptide Signal:   %s   cut: 32 range:32-170
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ISKHSFSSRM ITIGIFLVLF SAHDLFNFSE AQQLQFGFYS ETCPSAESIV GDVVKQAVSK DPGNAAVLLR LHFHDCFVEG CDGSILIKHE VNDDERFAPG NAGVGGFDVI DNAKSELERL 
CPGVVSCADI VALAARDAVI AEKGPFYEVP TGRRDGLTSD KSNAANFSDV 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. short PS and 3'end are missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATATCGAAG CATTCATTTA GTTCGAGAAT GATCACTATT GGAATCTTTC TAGTTTTGTT TTCTGCTCAT GATCTATTCA ATTTTTCAGA GGCACAACAA CTACAGTTTG GGTTCTATTC  AGAAACATGT CCATCCGCAG AATCCATCGT CGGTGACGTT GTTAAACAAG CAGTGAGCAA GGACCCTGGA AATGCTGCCG TCTTACTCCG TCTCCACTTC CATGATTGCT TTGTTGAGGG  TTGTGATGGG TCCATTCTAA TCAAACACGA AGTAAATGAT GACGAGAGGT TTGCTCCGGG TAACGCTGGT GTGGGTGGTT TCGATGTTAT AGATAATGCT AAATCAGAGC TTGAACGTTT  GTGTCCAGGC GTTGTGTCTT GTGCTGACAT CGTTGCTCTT GCTGCTAGAG ACGCTGTCAT TGCGGAAAAA GGACCTTTTT ACGAGGTTCC AACAGGTCGA AGAGATGGCC TGACATCAGA 
TAAGAGTAAC GCTGCTAACT TTTCTGATGT TGA 

Retrieve as FASTA