Entry information : BoPrx15-1Cb_other
Entry ID 7340
Creation 2010-05-17 (Christophe Dunand)
Last sequence changes 2010-05-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx15-1Cb_other
Name BoPrx15-1Cb_other
Class Class III peroxidase     [Orthogroup: Prx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx15-1Cb_other
start..stop
S start..stop
BoPrx15-1Ca_other 338 2e-121 1..172 1..172
BrPrx15-1Ac_other 338 5e-119 1..172 165..336
TsPrx15 327 1e-114 1..172 165..336
CrubPrx71 325 6e-114 1..171 166..336
Literature and cross-references BoPrx15-1Cb_other
DNA ref. GenBank:   FI726952.1 [3' end]
Protein sequence: BoPrx15-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172
PWM (Da):   %s   18850.13  
PI (pH):   %s   4.76
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SGSNNNIPAP NNTFSTILSR FNNQGLDLTD LVALSGSHTI GFSRCTSFRQ RLYNQSGNGS PDITLEQSYA TNLRQRCPPS GGDQNLSELD INSAGKFDNS YFKNLIENMG LLNSDQVLFS 
SNEESSELVK TYAEDQEEFL EQFAKSMIKM GNLSPLTGSS GEIRKNCRKI NS 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS. 5' end is missing.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTGAGTGGC TCAAACAACA ACATTCCTGC ACCCAACAAC ACTTTTCAGC ACAATTCTCT CGAGGTTTAA TAATCAAGGT CTCGATCTCA CCGACCTTGT TGCCCTGTCT GGTAAGCTTA  CTTTACACAC AAGGAAAAGA CATGGTCATG TTTAATTTAC GTGCTTCTCA AGTTAACATT AAAATCTAAA ACATTTATTA CTTATTTTCA GGGAGTCACA CCATCGGCTT CTCAAGATGC  ACGAGTTTCA GACAAAGACT TTACAACCAG TCCGGAAATG GAAGTCCCGA CATAACCTTA GAGCAGTCCT ATGCTACTAA CTTGCGCCAG AGGTGTCCGC CATCAGGTGG AGACCAAAAC  CTGTCGGAGC TTGACATCAA CAGTGCCGGA AAGTTTGATA ACAGCTACTT CAAGAACTTG ATCGAGAACA TGGGACTTTT GAATTCTGAC CAGGTCTTAT TCTCTAGCAA CGAGGAATCT  AGCGAGCTTG TGAAGACATA TGCAGAGGAT CAGGAAGAGT TCCTCGAGCA GTTCGCAAAA TCAATGATCA AGATGGGGAA TCTCTCTCCC TTGACAGGTT CGAGTGGTGA GATCAGGAAG  AATTGCAGGA AGATTAACTC TTGATTTTGT GTGTGCTATG GAATGTGAGA AAAAGAAATG AAACATGTTT TCCGGGGGGT TAATGTTTGT GTGTTTTTTT GTCTTTTTGT ATGTTTTACT 
ATTTGAAAGT TGAATGAACA AACCTTTATT TAGTAGTTAT TTATATA 

Retrieve as FASTA