Entry information : MpPrx37(Mapoly0032s014x)
Entry ID 7373
Creation 2017-12-05 (Christophe Dunand)
Last sequence changes 2017-12-05 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-12-05 (Christophe Dunand)
Peroxidase information: MpPrx37(Mapoly0032s014x)
Name MpPrx37(Mapoly0032s014x)
Class Class III peroxidase     [Orthogroup: Prx250]*
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia polymorpha    [TaxId: 3197 ]
Cellular localisation N/D
Tissue type Thallus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpPrx37
start..stop
S start..stop
MpPrx34 258 2e-85 14..308 27..317
MpPrx38 256 1e-84 1..312 11..318
MpPrx36 250 3e-82 13..308 26..317
MpPrx35 246 1e-80 15..308 27..316
Literature and cross-references MpPrx37(Mapoly0032s014x)
Literature Yamato,K.T., et al., Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system. Proc. Natl. Acad. Sci. U.S.A. 104 (15), 6472-6477 (2007).
EST ref. GenBank:   BJ857598.1 [Fragment]
Protein sequence: MpPrx37(Mapoly0032s014x)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   310
PWM (Da):   %s   30494.23  
PI (pH):   %s   5.41
Sequence
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Send to Peroxiscan
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IFTGFVQLMV NSLTEPFYAA NCPQGPAEVF EGVHCWVQGD RSLAPSLPRF NFHxxFRALS HASVLFDSMN GVPGEKEGKG SMRSLGAFEV IDDMKRQFEA LCPGLVACAD ILALAARDAI  VGGGAIPGVA RGRRDGVQFL ASEANTDLPP PLPDYDSVVS MLAEKGLNAR DMDLLSGEST xxxxxxxxxx xxxxxxxxxT ATDPRSHPVF AESLKKQCEP GDFSTEILMA QSKRADSWDY 
N*ISDLF*Gx xxxxxxEELK RYSAGLKVVR TMNRVGSPLN RESGNSVIKM GRAYFLTGIL TQGDIRMKIQ TL 

Retrieve as FASTA  
Remarks Pseudogene or partial sequence from genomic and 1 EST (short fragment). Strain="E". DNA contains stop, frame shift and missing fragment.
DNA
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GGACTCCACA AGCACTATGC TTAAGGCGAC ACGGTCAAGG CTGCGTGCTC CTTGACTGCT GGTACACCGC CGAACTAACA CCCCGAAGCC CATCTGTACA CAGGAACGAA CAATGTGAGC  AGCAGGAGGG AGGGAGGCAA GGAGGGAGGG AGGTCGGGAA GCAACGCGGT GAACCTCAGC AGGACCCACC CGATCTCTAA AAAGGTCGTC ACCTCTAGCA CACGACCTCC CTCGATCTGC  AGGTCTCTCG AGAAGTGTTC CATCGCAGCC TTTCACAGGG AGCTAAATTT GGAGTTTGTC ATCGGACGGT GAATCGGATT TAGAACTTAA AGAGACGAGG CGCTGTCAGG TCTGCTCACG  CTGATGATGT CCTTCCTGAA CCGATGGTGT CGGAGCATCG TAGCTACAGC CAACTCAGAG TTCGCTACAG AAAACCAAGA GGCATGCAAA GAACTCGTCC ATTCTCTCAG CATCTGGCAT  CTCCATGCGC AGTTTGGTAC ATTCTGCGAC CGAATTGTTC AAATTGCTGA TACCTTCACC TTCATCTTCT TCTCTTCAAA GTCCTTTATT CCTCTCACGT GCTCAATTGC CCAATTGCCA  CTAGTGCAAG TCACACAGTG AAATCGCAAT CTTGAGATCC TGATGTTCTT TGTGAAGGCT GGATCGAGAT CCACACGACT GCATGTCGAA TTGCTTCTCT CGCACGTTCC TTGCGAGAAA  CTAGTCTTTA CTCCGCAGCT AACCAGGCAT CTTCTGACGT TCCTCCAGTT CGAACTGAAG GAGACCTGCA CGTAGACGAT TCAGAACGGC CTGCAGTATT TCCCGTCAGT TATCTGTAAC  TGTTCCCGTC GATCGGATGG AAGCTTTGAA GAATAAGCCG AAGAATATTT ACGGGTTTCG TCCAGCTTAT GGTCAACTCT CTAACTGAGC CCTTCTATGC CGCCAACTGC CCTCAAGGCC  CCGCCGAGGT GTTCGAGGGG GTCCATTGTT GGGTGCAGGG CGACAGGTCC CTCGCCCCAT CTCTCCCAAG GTTCAACTTC CATACGCCCA TCTCGATCCT TATATCAACA TCACATCCCA  TAATGAGAAC CCGACCTTCG TTCTCGAGGT TCGATGGAGG ATGATCCAGG CTCCTTACAG GCCATACAGA TATAGATTCG GAGCGCCGAT CATGTCTTTG TGTCATGGCT CAGTTCACTT  CAGAGCACTG AGCCATGCAT CTGTTCTTTT CGACTCGATG AATGGCGTAC CTGGCGAGAA GGAGGGCAAG GGCAGCATGC GCTCTCTCGG GGCATTTGAG GTCATCGACG ACATGAAGAG  GCAGTTCGAA GCCTTGTGCC CAGGTCTCGT TGCCTGCGCC GACATTCTTG CTCTGGCTGC CCGAGACGCC ATCGTAGTGG TAAGTTGGTC TTGGTAACTC AGGAAGACTA TGTCGAACTC  GGATATCTGG TGATGACGAG ATGCAATGAG AACAAAACTT CTCGAGTCTC CTGCAATGTT GGATTGCGTG AAGAATATGT TTTCAGCTGA AATACCACTT GGACACAGAT CCATTTGTTA  CGAGCATATA CGAACTGTTC TAGTTCGATG TTGTTCTACC TTGAAGAGCC CCGGTGCGTC GTGATTGCAG ATGGGAGGAG GAGCGATCCC GGGGGTTGCT CGAGGTCGAC GCGACGGAGT  GCAGTTTTTG GCATCGGAGG CCAACACCGA CCTTCCACCT CCACTTCCCG ACTACGATAG CGTCGTCAGC ATGCTGGCCG AGAAGGGCCT CAACGCCAGG GACATGGATT TGCTGTCAGG  TGAATCCACA CGATACTTCA CTAGGCCCAC AGAGACAACT ATGACATAGA GCTTCGTATC AGAAGTGAAG TGCACATTCC TTACACAGTC TTATAAGAAT CTCTTGCCTG GATTGCATGC  TCCATTCTTC CTGCCCTTAC GGAAGTAGTG AGTGACTAGG GGCAAGACTT CCGGGAGCAT AAATATCTGA CTCCAGGAGT TGGGCAATTC AGGTTCGCAC ACAGTCGAAA AAGAAAATTG  CGCGGTCATG CAAAGTGGAC TTGACAGCCA CGGACCCGAG ATCGCACCCC GTTTTTGCTG AATCATTGAA GAAGCAGTGC GAGCCGGGAG ACTTCAGCAC AGAAATTCTG ATGGCTCAAA  GCAAGCGGGC TGATTCTTGG GACTACAACT AAATTTCCGA TTTATTCTGA GGCACGCTCT GTTCGGATCT GACGATGCGT TGAAGAGTTG AAGAGATATT CCGCTGGCCT CAAGGTCGTA  CGAACCATGA ACAGAGTAGG AAGTCCTTTG AACAGGGAGT CTGGAAACTC TGTGATCAAG ATGGGACGAG CCTACTTCCT CACTGGTATC CTCACTCAAG GCGATATCAG GATGAAAATA  CAAACTTTAG GAAGCAGTGG TCCACATCGA TCGACCGATC AGTCCTTCCT GACTCATAAT GTTATAGGTA GGTACGAATT CTGACCTCAT TTAAGAACCC ATAGAAGCAT ACATCTGTCA  GCCATATCTC TAGGGTTCCA TTACAGATTC AAACTTCAAT TGTATTTCTT TTTCTAAGGG ATTCACTAAC TTCATCATCA GGCCTCATTT ATCACACCCA CACATTATAT AATATCAACA  CACTAAAGAA GAACAGCATC TGCGAGAGAT TGTTTAGCTC CAGTTTAGTA AGCTATCTTG TTATTAGCTC TAGAGTCAAT AGCAGAGCTA TTCAACATGG CCACAGAAGT TTCAGACCTC 
CTAATTGAGA TGATTAGGCG TCCTTTTGGG CCGGTCCTAC CGTAGGCCTT CAGCATAGCC ACAGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTCCGGCGT TAGAGCGACA GGTCCCTCGC CCCATCTCTC CCAAGGTTCA ACTTCCATAC GCCCATCTCG ATCCTTATAT CAACATCACA TCCCATAATG AGAACCCGAC CTTCGTTCTC  GAGGTTCGAT GGAGGATGAT CCAGGCTCCT TACAGGCCAT ACAGATATAG ATTCGGAGCG CCGATCATGT CTTTGTGTCA TGGCTCAGTT CACTTCAGAG CACTGAGCCA TGCATCTGTT  CTTTTCGACT CGATGAATGG CGTACCTGGC GAGAAGGAGG GCAAGGGCAG CATGCGCTCT CTCGGGGCAT TTGAGGTCAT CGACGACATG AAGAGGCAGT TCGAAGCCTT GTGCCCAGGT  CTCGTTGCCT GCGCCGACAT TCTTGCTCTG GCTGCCCGAG ACGCCATCGT AGTGATGGGA GGAGGAGCGA TCCCGGGGGT TGCTCGAGGT CGACGCGACG GAGTGCAGTT TTTGGCATCG  GAGGCCAACA CCGACCTTCC ACCTCCACTT CCCGACTACG ATAGCGTCGT CAGCATGCTG GCCGAGAAGG GCCTCAACGC CAGGGACATG GATTTGCTGT CAGGTGAATC CACACGATAC 
TTCACTAGG 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGTTCCGGCG TTAGAGCGAC AGGTCCCTCG CCCCATCTCT CCCAAGGTTC AACTTCCATA CGCCCATCTC GATCCTTATA TCAACATCAC ATCCCATAAT GAGAACCCGA CCTTCGTTCT  CGAGGTTCGA TGGAGGATGA TCCAGGCTCC TTACAGGCCA TACAGATATA GATTCGGAGC GCCGATCATG TCTTTGTGTC ATGGCTCAGT TCACTTCAGA GCACTGAGCC ATGCATCTGT  TCTTTTCGAC TCGATGAATG GCGTACCTGG CGAGAAGGAG GGCAAGGGCA GCATGCGCTC TCTCGGGGCA TTTGAGGTCA TCGACGACAT GAAGAGGCAG TTCGAAGCCT TGTGCCCAGG  TCTCGTTGCC TGCGCCGACA TTCTTGCTCT GGCTGCCCGA GACGCCATCG TAGTGATGGG AGGAGGAGCG ATCCCGGGGG TTGCTCGAGG TCGACGCGAC GGAGTGCAGT TTTTGGCATC  GGAGGCCAAC ACCGACCTTC CACCTCCACT TCCCGACTAC GATAGCGTCG TCAGCATGCT GGCCGAGAAG GGCCTCAACG CCAGGGACAT GGATTTGCTG TCAGGTGAAT CCACACGATA  CTTCACTAGG CCCACAGAGA CAACTATGAC ATAGAGCTTC GTATCAGAAG TGAAGTGCAC ATTCCTTACA CAGTCTTATA AGAATCTCTT GCCTGGATTG CATGCTCCAT TCTTCCTGCC 
CTTACGGAAG TAGTGAGTGA CTAGGGGCAA GACTTCCGGG AGCATAATAT CTGACTC 

Retrieve as FASTA