Entry information : Sm1CysPrx01-2_62 (Sm1CysPrx01b_62)
Entry ID 7376
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-05-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: Sm1CysPrx01-2_62 (Sm1CysPrx01b_62)
Name (synonym) Sm1CysPrx01-2_62 (Sm1CysPrx01b_62)
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Sm1CysPrx01-2_62
start..stop
S start..stop
Sm1CysPrx01-1_20 456 1e-166 1..221 1..221
Ppa1CysPrx01 330 8e-117 1..221 1..221
Mp1CysPrx01 325 2e-114 1..221 1..221
Ppa1CysPrx03 320 1e-112 1..221 1..221
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 712367..713032 666  
complement(join(712367..713032))


exon

Literature and cross-references Sm1CysPrx01-2_62 (Sm1CysPrx01b_62)
DNA ref. Phytozome 11:   scaffold_62 (713032..712367)
EST ref. GenBank:   FE512148.1
Cluster/Prediction ref. UniGene:   Smo.3428
Protein sequence: Sm1CysPrx01-2_62 (Sm1CysPrx01b_62)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221
PWM (Da):   %s   24426.41  
PI (pH):   %s   6.51
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGLNLGDIVP DFKAESTMGT IKFHEYIDGS WAILLSHPSD FTPVCTSELG SLASRIHEFD RRGVKVIALS CNDVNSHREW LGDIESYCPE TKVKYPIVAD PSRDLAVRFG MLDPVEKDAA 
GMPLTCRACF VIGPDKRVRL SILYPASTGR NFSELVRVID SLQLTDKFSV ATPANWENGR KCMILPTISD EKAKEMFPKG FDTVKVPSGK AYIRLVEQPT L 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and ESTs. Unigene contains ESTs from both haplotype
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCTGA ATTTGGGCGA CATTGTGCCG GATTTCAAGG CGGAATCCAC AATGGGAACC ATCAAATTCC ACGAGTATAT CGACGGCAGC TGGGCGATTC TCCTCTCCCA CCCCAGCGAT  TTCACGCCCG TGTGCACGTC GGAGCTGGGA TCCCTGGCGT CGCGCATCCA CGAATTCGAT CGCCGCGGCG TCAAGGTGAT TGCTCTCAGC TGCAATGACG TGAATTCCCA CCGCGAGTGG  CTGGGCGACA TCGAGAGCTA CTGCCCGGAG ACCAAGGTGA AATACCCTAT CGTCGCCGAC CCAAGCCGCG ATCTGGCCGT CCGATTCGGG ATGCTCGACC CCGTGGAGAA GGATGCCGCG  GGGATGCCGC TGACTTGTCG CGCGTGCTTC GTGATTGGCC CGGATAAGAG GGTACGGCTG TCTATCCTCT ACCCGGCCAG TACGGGCAGG AACTTTAGCG AGCTCGTGCG CGTGATCGAT  TCCCTGCAGC TCACGGATAA GTTTAGCGTG GCCACGCCCG CGAACTGGGA GAATGGGAGG AAGTGTATGA TTCTTCCCAC TATCTCGGAC GAGAAGGCCA AGGAGATGTT TCCAAAAGGA 
TTCGACACCG TCAAAGTTCC ATCTGGTAAG GCCTACATCC GTCTCGTGGA GCAGCCAACT CTCTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCTGA ATTTGGGCGA CATTGTGCCG GATTTCAAGG CGGAATCCAC AATGGGAACC ATCAAATTCC ACGAGTATAT CGACGGCAGC TGGGCGATTC TCCTCTCCCA CCCCAGCGAT  TTCACGCCCG TGTGCACGTC GGAGCTGGGA TCCCTGGCGT CGCGCATCCA CGAATTCGAT CGCCGCGGCG TCAAGGTGAT TGCTCTCAGC TGCAATGACG TGAATTCCCA CCGCGAGTGG  CTGGGCGACA TCGAGAGCTA CTGCCCGGAG ACCAAGGTGA AATACCCTAT CGTCGCCGAC CCAAGCCGCG ATCTGGCCGT CCGATTCGGG ATGCTCGACC CCGTGGAGAA GGATGCCGCG  GGGATGCCGC TGACTTGTCG CGCGTGCTTC GTGATTGGCC CGGATAAGAG GGTACGGCTG TCTATCCTCT ACCCGGCCAG TACGGGCAGG AACTTTAGCG AGCTCGTGCG CGTGATCGAT  TCCCTGCAGC TCACGGATAA GTTTAGCGTG GCCACGCCCG CGAACTGGGA GAATGGGAGG AAGTGTATGA TTCTTCCCAC TATCTCGGAC GAGAAGGCCA AGGAGATGTT TCCAAAAGGA 
TTCGACACCG TCAAAGTTCC ATCTGGTAAG GCCTACATCC GTCTCGTGGA GCAGCCAACT CTCTAG 

Retrieve as FASTA