Entry information : Sm2CysPrx01-2_96 (Sm2CysPrx01b_96)
Entry ID 7378
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2011-02-23 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2012-01-27 (Nizar Fawal)
Peroxidase information: Sm2CysPrx01-2_96 (Sm2CysPrx01b_96)
Name (synonym) Sm2CysPrx01-2_96 (Sm2CysPrx01b_96)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Sm2CysPrx01-2_96
start..stop
S start..stop
Sm2CysPrx01-1_46 554 0 1..272 1..272
Gb2CysPrx 390 1e-138 37..271 44..279
Thas2CysPrx02 389 2e-138 58..271 67..278
Vv2CysPrx01 389 3e-138 53..271 49..273
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 53409..53627 219 N° 2 53268..53345 78 N° 3 53119..53200 82 N° 4 52984..53063 80
N° 5 52795..52920 126 N° 6 52626..52739 114 N° 7 52442..52561 120  
complement(join(52442..52561,52626..52739,52795..52920,52984..53063,53119..53200 ,53268..53345,53409..53627))


exon

Literature and cross-references Sm2CysPrx01-2_96 (Sm2CysPrx01b_96)
DNA ref. Phytozome 11:   scaffold_96 (52442..53627)
EST ref. GenBank:   FE516233.1 [5' end]
Cluster/Prediction ref. UniGene:   Smo.148
Protein sequence: Sm2CysPrx01-2_96 (Sm2CysPrx01b_96)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   272
PWM (Da):   %s   29285.16  
PI (pH):   %s   8.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATAGAAAFAATGHIVGGGATSSSSSAASAAPCRSSLFKAFDARLGASKISHLRRPAARIQPRRAFRSLAASASLDVPLVGNKAPDFEAESVFDQEFIKVKLSDYLGKKYVVLFFYPLDFTFVCPTEITAFSDRYSEFEKINTEVLGVSVDSFSHLAWVQTERKSGGLGDLRYPLVSDISKSISKAYNVLIPDQGIALRGLFIIDKEGIIQHATVNNLAIGRSVDETLRTLQAVQFVQDNPDEVCPAGWKPGDKSMKPDPKLSKDYFAAIA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and more than 100 ESTs. Unigene compiles ESTs from both haplotypes. Strain="Plant Delights".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTGCTGGAGCAGCAGCATTCGCAGCGACTGGCCACATCGTGGGAGGAGGAGCCACCTCCTCGTCCTCGTCTGCCGCCTCTGCTGCTCCATGCCGATCGTCCCTCTTCAAGGCA
TTCGATGCGAGGCTAGGAGCGTCCAAGATTTCCCACCTCCGCCGCCCCGCCGCGCGGATCCAACCTAGGAGAGCTTTCAGGAGCCTGGCTGCTAGCGCG
GTGAGTCTAGCACTTTTCCAT
GGAGATTTCGACGCCTGCATTGTGGATTTTCCTCTTTTCTAGAGCTTGGATGTTCCATTGGTGGGAAACAAGGCTCCGGATTTCGAGGCCGAGTCGGTCTTCGATCAGGAATTCATCAAG
GTATTTACGAGGAAAATGAAAGGTTACTCTTTGCTGTGTTCTTATTTCTCCCATGTCTTCGCCGCAGGTCAAGCTTTCGGACTACTTGGGCAAGAAGTACGTCGTTTTGTTCTTCTATCC
TTTGGACTTCACGTTCGTTTGCCCGACAG
GTTGGTCGGTGACAAGTGGAAGATTTCTTCTAACTTTTTCTTTTCCTCCTGCTAGAAATCACCGCTTTCAGCGATCGTTACTCAGAATTTG
AGAAGATCAACACGGAAGTGCTCGGAGTCTCTGTTGACAGTGTG
GTACGTGGAACTTTTCTCTTTAATTTTCTTTGCTCTCTCGCTAACAAAAGGATGCTCTTGCAGTTTTCCCATCTGG
CTTGGGTTCAAACCGAGAGAAAGTCGGGCGGCCTAGGCGATTTGCGCTATCCCCTTGTTTCAGACATCTCCAAGTCGATCTCCAAGGCTTACAACGTACTCATCCCCGATCAG
GTTCGTG
ACAAACTCCGTGTATACTTTGCGCAGATGACATTCTCTGTGTGTCCAGGGAATTGCCCTCCGAGGCCTCTTCATCATTGACAAAGAAGGGATCATCCAACACGCTACCGTTAACAACCTT
GCGATTGGAAGGAGTGTAGACGAGACCTTGAGAACGCTTCAG
GTGACGAAAGCTCTGGTGAATGCGAGTTTTAAGTTTTGATCTTTTTCTTCATTGTTTCTTCTAGGCGGTCCAATTCGT
CCAGGACAATCCAGACGAGGTGTGCCCCGCCGGATGGAAGCCTGGCGACAAGTCAATGAAGCCCGATCCAAAGTTGAGCAAGGACTACTTCGCTGCTATAGCTTGA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTG CTGGAGCAGC AGCATTCGCA GCGACTGGCC ACATCGTGGG AGGAGGAGCC ACCTCCTCGT CCTCGTCTGC CGCCTCTGCT GCTCCATGCC GATCGTCCCT CTTCAAGGCA  TTCGATGCGA GGCTAGGAGC GTCCAAGATT TCCCACCTCC GCCGCCCCGC CGCGCGGATC CAACCTAGGA GAGCTTTCAG GAGCCTGGCT GCTAGCGCGA GCTTGGATGT TCCATTGGTG  GGAAACAAGG CTCCGGATTT CGAGGCCGAG TCGGTCTTCG ATCAGGAATT CATCAAGGTC AAGCTTTCGG ACTACTTGGG CAAGAAGTAC GTCGTTTTGT TCTTCTATCC TTTGGACTTC  ACGTTCGTTT GCCCGACAGA AATCACCGCT TTCAGCGATC GTTACTCAGA ATTTGAGAAG ATCAACACGG AAGTGCTCGG AGTCTCTGTT GACAGTGTGT TTTCCCATCT GGCTTGGGTT  CAAACCGAGA GAAAGTCGGG CGGCCTAGGC GATTTGCGCT ATCCCCTTGT TTCAGACATC TCCAAGTCGA TCTCCAAGGC TTACAACGTA CTCATCCCCG ATCAGGGAAT TGCCCTCCGA  GGCCTCTTCA TCATTGACAA AGAAGGGATC ATCCAACACG CTACCGTTAA CAACCTTGCG ATTGGAAGGA GTGTAGACGA GACCTTGAGA ACGCTTCAGG CGGTCCAATT CGTCCAGGAC 
AATCCAGACG AGGTGTGCCC CGCCGGATGG AAGCCTGGCG ACAAGTCAAT GAAGCCCGAT CCAAAGTTGA GCAAGGACTA CTTCGCTGCT ATAGCTTGA 

Retrieve as FASTA