Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
188 |
PWM (Da): |
20518.69 |
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PI (pH):
| 9.23 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRQRALRIQSTLSARSRSVVTVSSSLDLDSDLALQEARTWDQGLESQFATTPLSQIFKDKRVVIFGTPGAFTGVCTKGHVPSYTKNVEQLKSKGVDSVICVAVNDPYTINAWAEKMNAKGKIQFFADFDGSFHKSLGLECDLSKALLGLRSQRWSAFVDDGVVKVLKVEKVPSELKVSDGETMIKAIH |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns) and 1 EST. Incorrect prediction from JGI (5'end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGGCAACGAGCGCTGCGGATCCAATCCACATTGTCCGCGCGCTCGAGGTCCGTCGTCACAGTCTCTTCCAGCCTCGACTTAGATTCCGACCTCGCATTACAGGAAGCGCGGACCTGG GACCAGGGTCTCGAATCCCAGTTCGCCACAACGCCGCTCTCCCAGATTTTCAAGGTCAGTATTGCTATTCTGCATTCGCTAGCAATACGATAATCTTGCTATGAACTTTCACTAGTTCTT GTGCTAGTATCTCATCAATCCCTTAGACAAAGTCTTCTAGCTCTAGACATTTAGAAGTTTCCTGTTCTCTTCATGTTCTCTTATCCCCTTTTTTGTCTTTCAGGACAAGCGTGTTGTCAT CTTCGGTACTCCAGTAAGTTATTCTTTCGTCTTTGTTGTTCTTCGAGGAAACAAGCAAAACTAAACAGAAGAAGAAGAAAAAAGAGATCGTAACTTACAATTCACTCCATTTCCATCCAG
GGCGCGTTCACGGGTGTCTGCACCAAGGGTCACGTCCCCAGCTACACCAAGAACGTCGAGCAGCTGAAATCCAAGGGCGTCGACTCCGTCATCTGCGTCGCGGTGAACGACCCCTACACC ATCAACGCCTGGGCCGAGAAGATGAATGCAAAAGGCAAGGTTAGCTTTCTTTTTCCTCCTCCTCTACGTGCGCTTATTTCTAAGAGTTTGGAACGCTCCCAGATCCAGTTCTTCGCCGAT TTCGACGGTAGCTTCCACAAATCTCTGGGCTTGGAGTGTGATTTGAGCAAGGCGCTGCTTGGCCTTCGTTCGCAGAGGTGGAGAAATCTCTTTCGGTATTTGCTTTTGACATTCTTGAGA AATAAACTACGCAGGTGGTCAGCATTTGTGGACGATGGTGTGGTGAAAGTCCTCAAGGTGGAAAAGGTTCCTTCGGAGCTCAAGGTTAGCGATGGCGAGACGATGATCAAAGCCATCCAT TAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGGCAACGAGCGCTGCGGATCCAATCCACATTGTCCGCGCGCTCGAGGTCCGTCGTCACAGTCTCTTCCAGCCTCGACTTAGATTCCGACCTCGCATTACAGGAAGCGCGGACCTGG GACCAGGGTCTCGAATCCCAGTTCGCCACAACGCCGCTCTCCCAGATTTTCAAGGACAAGCGTGTTGTCATCTTCGGTACTCCAGGCGCGTTCACGGGTGTCTGCACCAAGGGTCACGTC CCCAGCTACACCAAGAACGTCGAGCAGCTGAAATCCAAGGGCGTCGACTCCGTCATCTGCGTCGCGGTGAACGACCCCTACACCATCAACGCCTGGGCCGAGAAGATGAATGCAAAAGGC AAGATCCAGTTCTTCGCCGATTTCGACGGTAGCTTCCACAAATCTCTGGGCTTGGAGTGTGATTTGAGCAAGGCGCTGCTTGGCCTTCGTTCGCAGAGGTGGTCAGCATTTGTGGACGAT GGTGTGGTGAAAGTCCTCAAGGTGGAAAAGGTTCCTTCGGAGCTCAAGGTTAGCGATGGCGAGACGATGATCAAAGCCATCCATTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGGCAAC GAGCGCTGCG GATCCAATCC ACATTGTCCG CGCGCTCGAG GTCCGTCGTC ACAGTCTCTT CCAGCCTCGA CTTAGATTCC GACCTCGCAT TACAGGAAGC GCGGACCTGG
GACCAGGGTC TCGAATCCCA GTTCGCCACA ACGCCGCTCT CCCAGATTTT CAAGGACAAG CGTGTTGTCA TCTTCGGTAC TCCAGGCGCG TTCACGGGTG TCTGCACCAA GGGTCACGTC
CCCAGCTACA CCAAGAACGT CGAGCAGCTG AAATCCAAGG GCGTCGACTC CGTCATCTGC GTCGCGGTGA ACGACCCCTA CACCATCAAC GCCTGGGCCG AGAAGATGAA TGCAAAAGGC
AAGATCCAGT TCTTCGCCGA TTTCGACGGT AGCTTCCACA AATCTCTGGG CTTGGAGTGT GATTTGAGCA AGGCGCTGCT TGGCCTTCGT TCGCAGAGGT GGTCAGCATT TGTGGACGAT
GGTGTGGTGA AAGTCCTCAA GGTGGAAAAG GTTCCTTCGG AGCTCAAGGT TAGCGATGGC GAGACGATGA TCAAAGCCAT CCATTAA
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Retrieve as FASTA
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