Entry information : CruPrx09
Entry ID 7399
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-02 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-06-02 (Christophe Dunand)
Peroxidase information: CruPrx09
Name CruPrx09
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Sporophyll
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx09
start..stop
S start..stop
CmichPrx05 632 0 2..311 32..341
GbPrx39 510 0 4..311 60..367
PtaPrx03 501 0 1..310 13..321
PgPrx04 501 0 1..309 27..335
Literature and cross-references CruPrx09
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Cycas sporophyll (w/o ovule) (NYBG)
DNA ref. GenBank:   EX919456.1 [Fragment]
EST ref. GenBank:   EX919547.1 [3' end]
Protein sequence: CruPrx09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   311
PWM (Da):   %s   33124.81  
PI (pH):   %s   7.68
Sequence
Send to BLAST
Send to Peroxiscan
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VDAAGTVVGF YGKSCPSAER IVQLRVQRRF STDKTIPAAL LRMYFHDCFV RGCDASILLD STPGNQAEKE AGPNQTVRGY ELIDEIKKVL ESVCPNKVSC ADIIALATRD AVALAGGPRY  DVPTGRRDGT QSKVAEGNTL PDPSDSAIVS AAAFARKGLS VLDLVTLLGA HTLGITHCSF ISDRVFNFQG KGSPDPTMDP SLVTKLKQVC PNPSSGSTAD PAIALDQGTQ FVFDDSFYKQ 
IAARRGILTI DQELFDDAST SNIVRSYAGL TSASPSNFSR QFVLSMVKMG NLGVLTDNQG TIRKNCRAVN A 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs and 1 DNA contamination. Short PS is missing. Frame:1[1-933] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTCGATGCAG CAGGCACAGT GGTAGGATTT TACGGCAAGA GCTGCCCGAG TGCAGAGAGG ATCGTTCAGT TGAGAGTACA GAGAAGATTC AGCACCGATA AGACCATACC CGCTGCCCTT  CTTCGCATGT ATTTTCATGA TTGCTTCGTT CGAGGCTGTG ATGCTTCGAT TCTGTTAGAC TCGACTCCTG GAAATCAAGC AGAGAAAGAG GCGGGACCCA ATCAAACCGT GAGAGGATAT  GAGCTTATTG ATGAGATAAA GAAGGTCTTG GAATCCGTAT GTCCCAATAA AGTCTCCTGT GCTGATATAA TTGCTCTGGC TACGCGAGAT GCTGTGGCTC TGGCAGGCGG TCCTCGCTAC  GATGTTCCTA CAGGAAGACG GGACGGCACA CAATCCAAGG TGGCAGAGGG CAATACCCTT CCGGATCCCA GCGACAGCGC TATAGTGTCC GCTGCAGCCT TTGCTCGGAA GGGTCTATCG  GTTCTAGACC TCGTGACTCT ACTTGGTGCC CACACGTTGG GTATTACACA TTGTAGTTTT ATCAGCGACA GGGTCTTCAA TTTCCAAGGC AAGGGCAGTC CAGACCCGAC CATGGATCCA  AGCTTAGTCA CAAAGCTAAA GCAAGTATGT CCGAACCCGT CTTCGGGAAG CACAGCGGAC CCCGCCATAG CGCTGGATCA AGGAACTCAG TTTGTATTCG ACGACAGTTT CTACAAGCAG  ATTGCGGCGA GACGGGGGAT CTTGACCATC GATCAGGAGC TATTCGATGA TGCCAGTACT AGTAACATTG TAAGGAGCTA CGCAGGATTA ACATCCGCGT CTCCATCGAA CTTCAGCCGT  CAGTTTGTTC TGTCCATGGT CAAAATGGGC AACTTGGGCG TGCTTACTGA TAATCAAGGA ACTATTAGAA AAAACTGTCG GGCTGTGAAT GCTTAACGCA AGGGAACCTT GGCGTTTCGC 
AATCCACTGC AACTCTTCAA GTGCCTTTTC CATCAAAAAA AAAAAAAAAA AC 

Retrieve as FASTA